Gene Information

Name : M621_13970 (M621_13970)
Accession : YP_008159589.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2928341 - 2930266 bp
Length : 1926 bp
Strand : -
Note : decatenates replicating daughter chromosomes; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCGACTGTTTATTGCCGAGAAACCGAGTTTGGCGCGCGCCATTGCCGACGTTCTTCCCAAACCGCATCGTCGCGGTGA
CGGGTTTATTGCCTGTGGCAACAATGATGTGGTCACCTGGTGTGTGGGCCATTTACTAGAGCAGGCGCAGCCGGATGCCT
ACGATAGCCGCTATGCGCGCTGGTCGCTGGCGGATCTGCCCATTATCCCCGAAAAGTGGCAACTGCAGCCGCGTCCCTCG
GTCAGTAAACAGCTTAATGCGATTAAAAAGCTATTACATGATGCTGACGAGGTCGTGCATGCCGGTGACCCGGATCGCGA
AGGACAATTACTGGTGGATGAGGTGCTGGACTATCTGGCGTTGACGCCGGAAAAACGTCACAGCGTGCGCCGTTGCCTGA
TTAACGATCTCAACCCGCAGGCGGTGGAGCGCGCTATAGAACGGCTGCGTGACAACCGCGACTTTATCCCGCTGTGCGTC
TCCGCGCTGGCGCGTTCCCGCGCTGATTGGCTGTATGGCATCAACATGACCCGAGCCTATACCATCTTAGGGCGAAATGC
CGGCTATGACGGCGTGTTGTCCGTTGGGCGGGTGCAGACGCCGGTGTTGGGGTTAGTGGTGCGGCGTGATGAAGAGATTG
AAAACTTTGTGCCAAAAGACTTCTTTGAAGTCAAAGCGCACATCGTGACGCCAAAGGAAGAGCGCTTTGTCGCGCTTTGG
CAGCCGAGTGATTCTTGCGAGCCTTATCAGGACGAAGAAGGGCGTCTGCTGCATCGGCCGCTGGCGGAGCACGTGCTTAA
ACGCATCGAGGGCCAGCCTGCGCTGGTCACGTCCTATAATGATAAACGGGAATCAGATACCGCTCCGCTGCCGTTTTCGC
TCTCGACGCTGCAGATTGAGGCTTCCAAACGTTTCAACCTGAGTGCGCAGCAGGTGCTGGATGTCTGCCAGCGGTTGTAT
GAAACGCATAAATTGATCACCTATCCGCGTTCCGACTGCCGCTATCTGCCGGAAGAACATTTTGCCGGGCGTCATGCGGT
GCTTAACGCGATCAGCGCTCATCAACCGGATCTTTACCCGCAGCCGGTGATCGACAGCGATCGCCGCAACCGTTGCTGGG
ACGATAAAAAAGTTGATGCCCACCATGCCATTATTCCTACTGCCCGCGCCAGCAAAGTGAGCCTCAGTCAGGACGAATTG
AACGTCTACGGGTTGGTGGCGCGCCAGTACCTGATGCAGTTTTGCCCGGATGCCATGTTCCGCAAATGCGTGATTGAGCT
GGATATCGCCGGGGGGAAATTTGTTGCCAAAGCGCGTTTCCTGGCCGAAGCGGGCTGGCGGACGCTGCTGGGCAGCAAAG
AACGCGACGAAGAAAACGAAGGTTCTCCGTTGCCGGTGGTGGCGAAAGATGATGAGCTATTGTGCGAACGTGGTGAGGTG
GTGGAACGCCAGACTCAGCCTCCGCGGCCTTTCACCGATGCCAGTCTGCTTTCTGCCATGACTGGCATAGCGCGTTTCGT
ACAAGATAAAGCGCTAAAGAAAATCCTGCGAGCGACCGATGGTTTAGGTACCGAGGCGACGCGTGCGGGCATCATTGAGT
TGCTGTTCAAGCGGGCGTTTTTGTACAAGAAAGGGCGTTATATTCATTCCAGCGAGACCGGTCGGGCGTTGATCCATTCG
CTGCCGGATATTGCGGCTCGCCCTGATATGACGGCCAACTGGGAGGCTACGCTGACGCAAATCAGTGAAAAATCCTGCCG
CTATCAGGACTTTATGCAACCCTTGGTAGGTACTTTGCAGGAGCTGATTTATCAGGCCAAGCAAAGCCGGGCGAGTATGG
CGTTTCGCGGGTTGCCGCCGTCGCCTTCCGCCGGGGCAAAAAAACGCAAGAAAAGCGCCGGCAAGGCGCGGGAGAAAAGC
GAGTGA

Protein sequence :
MRLFIAEKPSLARAIADVLPKPHRRGDGFIACGNNDVVTWCVGHLLEQAQPDAYDSRYARWSLADLPIIPEKWQLQPRPS
VSKQLNAIKKLLHDADEVVHAGDPDREGQLLVDEVLDYLALTPEKRHSVRRCLINDLNPQAVERAIERLRDNRDFIPLCV
SALARSRADWLYGINMTRAYTILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVPKDFFEVKAHIVTPKEERFVALW
QPSDSCEPYQDEEGRLLHRPLAEHVLKRIEGQPALVTSYNDKRESDTAPLPFSLSTLQIEASKRFNLSAQQVLDVCQRLY
ETHKLITYPRSDCRYLPEEHFAGRHAVLNAISAHQPDLYPQPVIDSDRRNRCWDDKKVDAHHAIIPTARASKVSLSQDEL
NVYGLVARQYLMQFCPDAMFRKCVIELDIAGGKFVAKARFLAEAGWRTLLGSKERDEENEGSPLPVVAKDDELLCERGEV
VERQTQPPRPFTDASLLSAMTGIARFVQDKALKKILRATDGLGTEATRAGIIELLFKRAFLYKKGRYIHSSETGRALIHS
LPDIAARPDMTANWEATLTQISEKSCRYQDFMQPLVGTLQELIYQAKQSRASMAFRGLPPSPSAGAKKRKKSAGKAREKS
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 1e-111 41
topB AAN62317.1 putative DNA topoisomerase III Not tested PAGI-3(SG) Protein 1e-103 41
pph56 CAI36097.1 Topoisomerase IA Not tested PPHGI-1 Protein 4e-101 41