Gene Information

Name : araD (M621_13610)
Accession : YP_008159519.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.4
Position : 2857873 - 2858568 bp
Length : 696 bp
Strand : -
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGCTCAACGATCTCAAACAGCAGGTATTGGACGCTAATCTGGCATTGCCACGCCATCATCTGGTGACCTTCACCTGGGG
CAACGTCAGTGCCGTTGATCGCCAGGCAGGGCTGATGGTGATCAAACCCTCGGGGGTGGAGTATGGGGTGATGACCCGCG
ACGACATGGTTGTGGTGGAACTCGAAAGCGGCAAGGTGGTGGAGGGCAATAAAAAACCCTCTTCAGACAGTGATACCCAC
CGGGCATTGTATCTCGAGTTCGACGCGGTCGGCGGCATCGTGCACACCCATTCGCGACATGCCACCATCTGGGCGCAGGC
CGGCCAGGATATTCCCGCCTGGGGCACGACTCATGCCGATTACTTCTACGGTGACATTCCTTGTACGCGAACAATGCGGG
ATGAGGAAATCGCCGGGCGTTATGAATGGGAGACCGGCAGGGTGATCGTCGAAACCTTCCGCGAAAGGCGATTGGATCCG
GCCAGCATGCCGGCGGTACTGGTACATTCGCACGGGCCGTTTACCTGGGGCAAAGACGCGGAGAACGCGGTGCACAATGC
CGTCGTGCTGGAGGAGATTGCCTATATGGGGATTTTTTCACGCCAGTTGACGCCAGGGCTGGCGAACATGCAGCAAACGC
TGCTGGATAAGCACTACCTGCGCAAGCACGGTAAAAATGCTTATTACGGACAGTGA

Protein sequence :
MLNDLKQQVLDANLALPRHHLVTFTWGNVSAVDRQAGLMVIKPSGVEYGVMTRDDMVVVELESGKVVEGNKKPSSDSDTH
RALYLEFDAVGGIVHTHSRHATIWAQAGQDIPAWGTTHADYFYGDIPCTRTMRDEEIAGRYEWETGRVIVETFRERRLDP
ASMPAVLVHSHGPFTWGKDAENAVHNAVVLEEIAYMGIFSRQLTPGLANMQQTLLDKHYLRKHGKNAYYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 8e-60 56