Gene Information

Name : M621_12890 (M621_12890)
Accession : YP_008159378.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : lysine 6-monooxygenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2697284 - 2698609 bp
Length : 1326 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAACCAGCGTTTGGACTTTATCGGCATTGGTATCGGCCCGTCCAACCTCAGTCTTGCTGCGCTTGGAAGCGAAATCGA
AGGTTTCAATTGCAAATTCCTCGAACGCAAACCGCACTTTTCCTGGCACCCCGGCATGATCCTGGCAGATAGCAATATGC
AGACCCATTTTTTGAAGGATCTGGTCACCGCCGTTTCGCCAACCAACCCTTATAGTTTTCTCAACTATCTGGTGAAGAGT
AAAAAGTTCTACCGCTTCCTGACGACTGAACAGCGTACTGCGTCGCGCGAAGAGTTTGCCGATTATCTCAACTGGGCGGC
AACGGGGTTGGATTCGCTGATGTTCAATCAAGAGGTTCGCCGCGTGGACTTTGATGACGAACAGCGGCAGTTTGTCGTCA
CCACCCAGGATGACGTGCTTTACGCTAAACACCTGTGTGTGGGCATAGGCAAGCAAATCAAACTGCCGAACTGCGTGACC
GAACAAAACGATCAATGCTTTCACGCCAGCGAAATGATGTTGCGCCAGCCAAACCTTGCCGGAAAACGCGTGGTCATTGT
GGGCGGCGGTCAAAGCGGTGCCGACCTGTTCTTGAATATTTTCCAAGGGGAATGGGGCCGACCAGAACACCTTGGCTGGA
TATCTCGACGCAACAACTACAACGCACTTGATGAAGCCGCCTTTGCCAACGAGTATTTTACGCCGGATTATGTCGACAAC
TTCTACACGCTCGGCCACGCAGCCAAAGAACGCATGCTGCAAGAACAAAAGATGACTTCCGATGGGATCACCAGTGAGTC
TCTGTTGGCAATTTACCGCGCCATGTATCACCACTTCGACGTACTCCGCGAGAAACGATGGGTGAGCCTGCTGCCCAGCC
GTTCAGTTACGGCCCTTAATGCCAAAGATAATGCTTATCGGTTAGAGACGCTGCATCACCTTGATCAAGGGCGAGAAAGC
TTTGATGCAGATGTGGTCATTTTTGCGACCGGCTATGAACAGGTCCGCCCGGCATTTCTTGACTCCCTGGCTGATCGTTT
GTTGACCACCCCCGATGGGCAATACCGTATCGCTTCTGATTTTACCCTTGAGCGGGAAGGGGAACATGAGAATTGCTTGT
TTGCCGTTAACGCCAGCATGCATCACCACGGCATTGCCGATCCGCAGCTTAGCCTGGTGGCCTGGCGATCGGCACGTATT
CTCAATCGAGCTTTAGGCCACAACCAATTTGATTTGAGCACCACTCCGGCGATGATTCAATGGCGCAGTGAGCAAGAACA
ACCCGTCGCTTTAAATCCCTTGATGGCCGCTTGGTCACCCCTTTAA

Protein sequence :
MNQRLDFIGIGIGPSNLSLAALGSEIEGFNCKFLERKPHFSWHPGMILADSNMQTHFLKDLVTAVSPTNPYSFLNYLVKS
KKFYRFLTTEQRTASREEFADYLNWAATGLDSLMFNQEVRRVDFDDEQRQFVVTTQDDVLYAKHLCVGIGKQIKLPNCVT
EQNDQCFHASEMMLRQPNLAGKRVVIVGGGQSGADLFLNIFQGEWGRPEHLGWISRRNNYNALDEAAFANEYFTPDYVDN
FYTLGHAAKERMLQEQKMTSDGITSESLLAIYRAMYHHFDVLREKRWVSLLPSRSVTALNAKDNAYRLETLHHLDQGRES
FDADVVIFATGYEQVRPAFLDSLADRLLTTPDGQYRIASDFTLEREGEHENCLFAVNASMHHHGIADPQLSLVAWRSARI
LNRALGHNQFDLSTTPAMIQWRSEQEQPVALNPLMAAWSPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-128 60
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-128 60
iucD AAD44749.1 IucD Virulence SHI-2 Protein 1e-128 60
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 2e-128 59
iucD AAK71634.1 IucD Virulence SHI-3 Protein 2e-128 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_12890 YP_008159378.1 lysine 6-monooxygenase VFG0618 Protein 6e-129 60
M621_12890 YP_008159378.1 lysine 6-monooxygenase VFG0937 Protein 8e-129 59
M621_12890 YP_008159378.1 lysine 6-monooxygenase VFG1084 Protein 1e-128 59