Gene Information

Name : M621_10720 (M621_10720)
Accession : YP_008158951.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : iron ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2226758 - 2227648 bp
Length : 891 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGACCACCGAGGTTTTTGTCCGCCCTGAGCTGATCGTGGATGACGTTACCGTTACCTATAACAACGGCCATACCGCGAT
CCACAACGCCAGTTTTAACCTGAGCGGCGGCGCCATTTGCGCGTTGGTCGGCGTCAATGGCAGCGGCAAGTCGACGCTGT
TCAAAAGTATCATGGGGCTGGTCAAACCCACCACCGGCCGTGTGCAGTTGAACGACAAACCGGTGGCGCAAGCGCTGAAA
AAAAATATTATTGCCTACGTCCCGCAAACCGAAGACGTCGACTGGAACTTCCCGGTTCTGGTGGAAGACGTAGTGATGAT
GGGCCGCTACGGCAAGATGAATTTTCTGCGCATTCCCTCCCGGGAAGACCGACTGCGCGTCGACAAAGCGCTGGAGCGCG
TTGGCCTGAGCGAACTGCGTACTCGCCAGATCGGCGAGCTTTCCGGCGGGCAGAAAAAACGGGTGTTCCTGGCGCGGGCG
CTGGCGCAACAAGGTTCCGTGCTGCTGTTGGATGAACCCTTCACCGGCGTGGACGTCAAAACCGAGAACGCAATTATCGA
TCTGCTGCGCGCGTTGCGTGACGAGGGTCACCTGATCCTGGTTTCCACCCATAACCTGGGCAGCGTGCCGGAATTCTGCG
ACCGGGTGATCCTGATTAACCGCACGGTGCTGGCCGCCGGCCCAACCGAAACCACCTTCACCCAAAGCAACCTGGAACAG
GCGTTCGGCGGCGTGTTGCGCCATATCAACCTGTCCGGCCCGGATCTGCACGACGATAACGATCCGCGCACCGTGACGGT
ATTGACCGATGACGAACGCCCGGCGGTGTTCTACGGCCATACCAAGAGCGACCCTCCGGCGCAAAGCCAGCCAAAGGAGA
AGCAACTCTGA

Protein sequence : 
MTTEVFVRPELIVDDVTVTYNNGHTAIHNASFNLSGGAICALVGVNGSGKSTLFKSIMGLVKPTTGRVQLNDKPVAQALK
KNIIAYVPQTEDVDWNFPVLVEDVVMMGRYGKMNFLRIPSREDRLRVDKALERVGLSELRTRQIGELSGGQKKRVFLARA
LAQQGSVLLLDEPFTGVDVKTENAIIDLLRALRDEGHLILVSTHNLGSVPEFCDRVILINRTVLAAGPTETTFTQSNLEQ
AFGGVLRHINLSGPDLHDDNDPRTVTVLTDDERPAVFYGHTKSDPPAQSQPKEKQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-82 67
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-82 67
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-83 67
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-83 67
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-82 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_10720 YP_008158951.1 iron ABC transporter permease BAC0440 Protein 6e-125 84
M621_10720 YP_008158951.1 iron ABC transporter permease BAC0350 Protein 2e-83 67
M621_10720 YP_008158951.1 iron ABC transporter permease BAC0400 Protein 1e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_10720 YP_008158951.1 iron ABC transporter permease VFG0526 Protein 2e-83 67