Gene Information

Name : M621_07695 (M621_07695)
Accession : YP_008158358.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : PhoB family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1600171 - 1600884 bp
Length : 714 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGAAAAACCAAAGAGAATTTTAATCGTTGAGGATGACGGCGACATCGCCGAGCTGTTGCAGTTGCACCTGCGCGATGA
AGGCTACGACATTAGCCACGCCGCCGACGGCAATCTGGGCATGGCGATGCTGGAACAGGGCGGCTGGGACGCACTGATCC
TCGATCTGATGCTGCCGGGCGTCGACGGGCTGGAGATCTGCCGCCGGGCGCGCAACATGACGCGCTACACGCCGATCATC
ATCATCAGCGCGCGCTCCAGCGAGGTGCACCGCGTGCTGGGGCTGGAGCTGGGTGCCGACGATTACCTGGCCAAACCCTT
CTCGATGCTGGAACTGGTGGCGCGGGTCAAAGCGCTGTTCCGCCGCCAGGAGGCGATGAGCCGCAACCTGCGTATGGACG
CCGGCACGCTGAGCTTTGACGGCTTGACCATAGACCCCATAGCCCGCGAAGTGCAGCTGAATCGGCAACCGATCGATCTG
ACGCCGCGCGAGTTTGACCTGCTGTATTTCTTCGCTCGCCATCCGGGCAAGGTGTTCTCCCGCCTTAGCCTGTTGAACCA
GGTGTGGGGCTATCAGCACGAGGGGTATGAACACACGGTGAATACCCATATCAACCGGCTGCGCATCAAGATAGAAAGCA
ACCCGGCGGAACCCCTGCGCATCCTCACGGTGTGGGGGATGGGCTATAAATTCGCGGCGCCGCCGCAAGAGTAA

Protein sequence : 
MEKPKRILIVEDDGDIAELLQLHLRDEGYDISHAADGNLGMAMLEQGGWDALILDLMLPGVDGLEICRRARNMTRYTPII
IISARSSEVHRVLGLELGADDYLAKPFSMLELVARVKALFRRQEAMSRNLRMDAGTLSFDGLTIDPIAREVQLNRQPIDL
TPREFDLLYFFARHPGKVFSRLSLLNQVWGYQHEGYEHTVNTHINRLRIKIESNPAEPLRILTVWGMGYKFAAPPQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-76 67
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-76 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_07695 YP_008158358.1 PhoB family transcriptional regulator AE000516.2.gene3505. Protein 4e-39 45
M621_07695 YP_008158358.1 PhoB family transcriptional regulator HE999704.1.gene1528. Protein 1e-35 43
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_012469.1.7685629. Protein 3e-40 43
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_010079.5776364.p0 Protein 2e-35 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_002952.2859858.p0 Protein 2e-35 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_007622.3794948.p0 Protein 2e-35 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_003923.1003417.p0 Protein 2e-35 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_013450.8614146.p0 Protein 2e-35 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_002951.3238224.p0 Protein 2e-35 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_007793.3914065.p0 Protein 2e-35 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_002758.1121390.p0 Protein 2e-35 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator AE015929.1.gene1106. Protein 6e-32 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator AF155139.2.orf0.gene Protein 1e-42 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator FJ349556.1.orf0.gene Protein 3e-39 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator AE016830.1.gene1681. Protein 4e-45 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_012469.1.7686381. Protein 2e-41 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator HE999704.1.gene2815. Protein 7e-41 42
M621_07695 YP_008158358.1 PhoB family transcriptional regulator BAC0596 Protein 3e-31 41
M621_07695 YP_008158358.1 PhoB family transcriptional regulator BAC0039 Protein 1e-31 41
M621_07695 YP_008158358.1 PhoB family transcriptional regulator CP001138.1.gene2239. Protein 3e-31 41
M621_07695 YP_008158358.1 PhoB family transcriptional regulator CP000034.1.gene2186. Protein 1e-31 41
M621_07695 YP_008158358.1 PhoB family transcriptional regulator NC_002695.1.916589.p Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_07695 YP_008158358.1 PhoB family transcriptional regulator VFG1563 Protein 2e-76 67
M621_07695 YP_008158358.1 PhoB family transcriptional regulator VFG1702 Protein 3e-76 67