Gene Information

Name : hemC (M621_00690)
Accession : YP_008157008.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 160467 - 161408 bp
Length : 942 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTAGACAAAATTATTCGAATTGCCACCCGACAAAGCCCGCTAGCACTCTGGCAAGCACATTATGTGCAACAGCGCCT
GATGGCCAGCCACCCCGGCCTGCAGGTTGAACTGGTGCCAATGGTCACAAAGGGCGACATTATTCTGGATACGCCGCTGG
CGAAAGTCGGCGGTAAAGGCCTGTTTGTTAAAGAGCTTGAGTTGGCGTTGCTGGAAGGCCGCGCCGATATCGCCGTCCAT
TCGATGAAAGACGTCCCGATAGATTTCCCCGCCGGCCTGGGCCTGGTGACCATTTGCGAGCGTGACGATCCACGCGACGC
CTTTGTTTCCAATCGTTTCGCCTCGTTCGATCAGTTGCCGCAGGGCAGCGTGGTTGGCACCTCAAGCCTGCGCCGTCAGA
GCCAGTTGCGCGAACGCCGGCCGGATTTGATCGTGCGCGATTTGCGCGGCAACGTCGGTACCCGCCTGGCCAAGCTGGAT
AACGGTGATTACGACGCCATTATTCTGGCGGTCGCCGGGTTGAAACGCCTGGGGCTGGAGCAACGTATCCGCAGCCCATT
GAGCCCCGAAGAGTGCCTGCCGGCCGTCGGTCAGGGCGCGGTGGGCATCGAATGCCGCCTCGACGATGACGCCACGCGTG
CGCTGCTCGCACCGCTCAATCACGCCGCAACCGATATCCGCGTGCGCGCTGAACGGGCGATGAATACGCGGCTGGAAGGC
GGCTGTCAGGTACCGATCGGCAGCTATGCCGAACTGGAAGGTGACAGCCTGTGGCTGAGAGCCTTGGTCGGCTCACCGGA
CGGCAGCCAGATGGTGCGCGGCGAACGTCGCGGCCCGGCGGCCCTGGCCGAACAAATGGGCGTTGAGCTGGCGGAAGAAC
TGCTGGCACGTGGCGCACGTGAAATCCTGCATGACGTTTATCAGGGAAATCCCCCGGCATGA

Protein sequence :
MLDKIIRIATRQSPLALWQAHYVQQRLMASHPGLQVELVPMVTKGDIILDTPLAKVGGKGLFVKELELALLEGRADIAVH
SMKDVPIDFPAGLGLVTICERDDPRDAFVSNRFASFDQLPQGSVVGTSSLRRQSQLRERRPDLIVRDLRGNVGTRLAKLD
NGDYDAIILAVAGLKRLGLEQRIRSPLSPEECLPAVGQGAVGIECRLDDDATRALLAPLNHAATDIRVRAERAMNTRLEG
GCQVPIGSYAELEGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGVELAEELLARGAREILHDVYQGNPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-82 63
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-82 63