|
Name : M621_06740 (M621_06740) Accession : YP_008158168.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Virulence Product : fimbrial protein StfD Function : - COG functional category : - COG ID : - EC number : - Position : 1420580 - 1421329 bp Length : 750 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAAAACCAATAATCTAGTGACATTAATTGCCGGCGGCCTGGCGGGCCTGCTGTGCGCCCAACAGGCGAGCGCCGCCAT CGCGCTGGACCGAACCCGGGTAATCTTCAGCGGCGGCGACAAGTCGGTGAGCATGAGCATCAGCAACGAGAACAAGCAGC TGCCTTACCTGGCACAGGGCTGGATCGAAGACGCCAACGGCAAAAAAATCACCAGCCCATTGGCGGTATTGCCGCCGGTG CAACGCCTGGAACCGGGTGCCAAGAGCCAGGTGAAAGTGCAGGGGTTGCCGGCCGCCAATACGCTGCCGCAGGACCGCGA AACGCTGTTCTACTTCAACCTGCGCGAGATCCCGCCGAAGAGCGACAAACCCAACACGCTGCAACTGGCGCTGCAAACCC GCATCAAGCTGTTCTACCGGCCGAAGGCGATTGCGGTAGCCAACCCGGAAGCCAGCGCGCCGTGGCAGGAAAAACTGACG CTGACTAAACAGGGCGACAGCTACCAGGTGAATAACCCGACGCCCTATTACGTGACGCTGGTTGACGCCAGCAGCAAAAA AGACGGTGCCAGCGCACCGGGCTTCGAACCGCTGATGGTAGCGCCCAAGGGCAGTGCGCCGCTGAAGGTTGCGGCCTCTG CGTTGGGTAACGCGCCGGTGCTGACTTACGTCAACGACTACGGCGGCCGCCCGCAACTGAGTTTTAACTGTAACGGCGCG AGCTGCCAGGCGGTAGCGGGCAGCAAATAA Protein sequence : MKTNNLVTLIAGGLAGLLCAQQASAAIALDRTRVIFSGGDKSVSMSISNENKQLPYLAQGWIEDANGKKITSPLAVLPPV QRLEPGAKSQVKVQGLPAANTLPQDRETLFYFNLREIPPKSDKPNTLQLALQTRIKLFYRPKAIAVANPEASAPWQEKLT LTKQGDSYQVNNPTPYYVTLVDASSKKDGASAPGFEPLMVAPKGSAPLKVAASALGNAPVLTYVNDYGGRPQLSFNCNGA SCQAVAGSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 5e-53 | 54 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 7e-60 | 54 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 1e-59 | 54 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 2e-59 | 54 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 2e-59 | 54 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 1e-59 | 54 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 1e-59 | 54 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 4e-61 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M621_06740 | YP_008158168.1 | fimbrial protein StfD | VFG0885 | Protein | 2e-53 | 54 |
| M621_06740 | YP_008158168.1 | fimbrial protein StfD | VFG1547 | Protein | 4e-60 | 54 |
| M621_06740 | YP_008158168.1 | fimbrial protein StfD | VFG0896 | Protein | 8e-60 | 54 |
