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Name : M621_06735 (M621_06735) Accession : YP_008158167.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Virulence Product : fimbrial protein SteB Function : - COG functional category : - COG ID : - EC number : - Position : 1418078 - 1420573 bp Length : 2496 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : TTGGGGCTGTTGATCGCCTTTATTCTGGCGGGGAATGCTGCCAATGTCGCAGCTGCTGATATTGAATTCAATACCGACGT ACTGGATGTGACGGATCGCGCCAATATTGACCTGGAGCAGTTTTCTCGCGGCAATTTTATTATGCCCGGCGATTATCTGT TTTCCGTGCATATTAATAAACAGACATTAACCGATCAGCCGGTGGCGTTTTACCCGCCGGATGACGATGCCAAAGGCAGT GAAGCCTGTATTACGCCGCAGTTGGTTGAACAACTGGGGTTAAAAGAGTCTGCATTACTTAAATTGACCTGGTGGCACCA AAACCAGTGTCTGGATCCCCGCAGCCTGGAGGGGATGGAAGTGCGTGGCGATTTAGGCGCGGCGGCACTGTACCTGAATA TTCCGCAGGCGTACCTGGAATACACCGCAGAAAACTGGGACCCACCTTCACGCTGGGACGAGGGGATCCCGGGGGTGCTG TTCGATTACAACCTGAATGCGCAAAGCCAGCGCCAGCAAAAGCAGGGCACACAGAGCTATAACCTCAGTGGCAACGGCAC GCTGGGCGGCAACCTGGGGGCCTGGCGCCTGCGGGCAGACTGGCAATCGCGGCTGGATCACCAGGGCGGCTCGGGCGAGC CGACTCGCACCAGTTGGGACTGGAGCCGTTACTACGCCTACCGCGCACTGCCAAAGCTGGGCGCCAGGCTGACGATGGGC GAGGACTATTTAAACTCCGACATCTTCGACAGCGTGCGTTTTGCCGGTGCCAGCCTGGTGACCGACGACAACATGCTGCC ACCCAACCTGCGTGGCTATGCGCCTGAGGTGACCGGCGTAGCGCGCAGCAACGCCAAGGTGATTATTCGCCAGCAAGGGC GCGTGCTGTATGAAACCCAGGTGGCGGCGGGGCCGTTCCGCATTCAGGACATCAACGATGCGGTCAGTGGCCAGTTGGAC GTGCGGGTGGAAGAGCAGGACGGCAGCGTGCAGGAGTTCCAGATGGACACCGCCAGCATCCCGTACCTGACCCGGCCCGG CTCGGTGCGTTACAAGCTGGCGGCCGGCCGGCCGGCGGACTGGGAGCACCATAGCGACGGGCCGATGTTCGGTACCGGCG AGTTCTCCTGGGGCGTGAGCAACGGCTGGTCGCTGTACGGCGGCGGCGTGGCGGGCGGCGATTACAACGCGCTGGCGCTG GGGGTGGGGCGTGACCTGATGATGTTCGGCGCACTGTCTTTCGACGCCACCCAGTCACGCGCCAATTTGCCGCAACAGGG CACCCTAAGCGGCGGTTCATACCGCCTGAGCTATTCCAAGCGCTTTGACGACTATGACAGCCAGGTGACCTTTGCCGGCT ACCGCTTCTCGGAGCGCAACTATATGTCGATGGGCGAATACCTGGATGCACGCCGCGACGGTACGCGAACCAACAGCAGC AAGGAGATGTACACCATCACCTTTAACCAGCAGTTCCGTGACCTGGGGTTGAGTGCCTATCTCAACTACAACCACCAGAC CTACTGGGACCGGCCGGCGAATGACCGTTACAACCTGACGCTGTCGCGCTATTTCGATCTGGGGCGTTTCCGGAATATCA GCCTGTCGCTGACCGGCTATCGCAACAAATATAACGGCACCAACGACGATGGCATGTACCTGTCGCTGTCGCTGCCGTGG GGCAGCAATGGCTCGCTGAGTTACAGCGGCAGTTACAACCGCAACGATAACACCCATCAGGTGGGGTATTACGACCGGCT CAATGAGCGCGACACCTATCAGGTGAGCGCCGGTACTGCACGCAGCGGCGCGACCGCCAGCGGCTACTACAGCCACAGCG GCGATCTCAGCCAGGTGAACGCCAGCGCCAGCTACCAGGCCGGGCAGTACAGCTCGCTGGGGCTGTCGATGCAGGGCGGC GCGACCGCCACCCTGAAAGGGGCGGCGTTGCACCGCAGCAGCATGAGCGGGGGTACCCGTATGTTGCTGGATACCGACGG CGTGCCGGGGATCCCGATCCGCGGTTACAGCTCACCGACGCTGACAAATGCGTTCGGCAAAGCGGTGGTGGTGGACGTCG GCAGTTACTACCGCAACCAGTTCAGTATCGATCTGAACACGTTGCCGGAAAACGCCGAAGTCAGCCAGAGCGTGGCGCAG GCCACCCTGACCGAAGGCGCTATCGGCTACCGGCACTTTGAGGTGATTGCCGGCGAGAAGGCGATGGCGGTTGTGCGGCT GGCGGACGGTTCTGCCCCGCCGTTTGGCGCCACGGTGCGCAACGGCAAGCGGCAGGAGGTGGGCATTATCAATGACAACG GCGAAGTGTACCTGAGCGGCATCAACGCCGGGGAGGCGATGAACGTGAGCTGGGGCGGCGCGGAGCAGTGCGGCTTTACC CTGCCGCAGACGCTGTCGCCGAGCCAATTGACCAATCTGTTACTGCCTTGTGGCCCGGTGGCCAACGGCAAGGCGTTAAA CACTGTTAAAGAGTAG Protein sequence : MGLLIAFILAGNAANVAAADIEFNTDVLDVTDRANIDLEQFSRGNFIMPGDYLFSVHINKQTLTDQPVAFYPPDDDAKGS EACITPQLVEQLGLKESALLKLTWWHQNQCLDPRSLEGMEVRGDLGAAALYLNIPQAYLEYTAENWDPPSRWDEGIPGVL FDYNLNAQSQRQQKQGTQSYNLSGNGTLGGNLGAWRLRADWQSRLDHQGGSGEPTRTSWDWSRYYAYRALPKLGARLTMG EDYLNSDIFDSVRFAGASLVTDDNMLPPNLRGYAPEVTGVARSNAKVIIRQQGRVLYETQVAAGPFRIQDINDAVSGQLD VRVEEQDGSVQEFQMDTASIPYLTRPGSVRYKLAAGRPADWEHHSDGPMFGTGEFSWGVSNGWSLYGGGVAGGDYNALAL GVGRDLMMFGALSFDATQSRANLPQQGTLSGGSYRLSYSKRFDDYDSQVTFAGYRFSERNYMSMGEYLDARRDGTRTNSS KEMYTITFNQQFRDLGLSAYLNYNHQTYWDRPANDRYNLTLSRYFDLGRFRNISLSLTGYRNKYNGTNDDGMYLSLSLPW GSNGSLSYSGSYNRNDNTHQVGYYDRLNERDTYQVSAGTARSGATASGYYSHSGDLSQVNASASYQAGQYSSLGLSMQGG ATATLKGAALHRSSMSGGTRMLLDTDGVPGIPIRGYSSPTLTNAFGKAVVVDVGSYYRNQFSIDLNTLPENAEVSQSVAQ ATLTEGAIGYRHFEVIAGEKAMAVVRLADGSAPPFGATVRNGKRQEVGIINDNGEVYLSGINAGEAMNVSWGGAEQCGFT LPQTLSPSQLTNLLLPCGPVANGKALNTVKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 8e-173 | 51 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 1e-156 | 49 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 2e-156 | 49 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 2e-156 | 49 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 2e-156 | 49 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 3e-155 | 48 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 2e-155 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M621_06735 | YP_008158167.1 | fimbrial protein SteB | VFG1548 | Protein | 8e-157 | 49 |
| M621_06735 | YP_008158167.1 | fimbrial protein SteB | VFG0884 | Protein | 9e-157 | 49 |
| M621_06735 | YP_008158167.1 | fimbrial protein SteB | VFG0895 | Protein | 9e-157 | 49 |
