Gene Information

Name : M621_06260 (M621_06260)
Accession : YP_008158077.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Unknown
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1323204 - 1323893 bp
Length : 690 bp
Strand : -
Note : response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGAGCAGCACGCCAACCAACATTCTGATTGTCGAAGATGAAAAAGAGATCCGGCGTTTCGTGCGCATCGCATTGGAAAG
CGAAGGTCTGCGGGTGTTTGAAAGCGAGACGCTACAGCGTGGGCTGATTGAAGCCGGCACGCGTAAACCGGATCTGATTA
TTCTCGATTTAGGGTTGCCGGACGGCGACGGGTTGAGCTATATCCGCGATCTGCGGCAGTGGAGCGCCATTCCGGTGATC
GTTCTCTCGGCGCGCAATGCCGAAGAGGACAAAATCGCCGCACTGGACGCCGGGGCGGACGACTATCTCAGCAAGCCCTT
TGGCATCGGCGAATTGCTGGCGCGGGTGCGGGTTGCCTTGCGCCGCCACTCCGGCAGCCAACAAGAAAGCCCGCTGGTCA
GTTTTTCCGAAATCACCGTCGATCTGATCAACCGCCGGGTGCTGCGCAATGGCGAAGATCTGCACCTGACGCCAATAGAG
TTTCGCCTGCTGGCCGAATTGCTGGCCAACTCCGGCAAAGTGATCACCCAACGTCAGTTGCTGAGCCACGTCTGGGGGCC
GAACTACGTCGAACACAGCCACTATCTGCGCATTTATATGGGGCACCTGCGGCAAAAGCTGGAAGCCGACCCGGCCCGGC
CGAAACACCTGCTGACCGAAACCGGCGTCGGGTACCGGTTTATGCCTTGA

Protein sequence :
MSSTPTNILIVEDEKEIRRFVRIALESEGLRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLSYIRDLRQWSAIPVI
VLSARNAEEDKIAALDAGADDYLSKPFGIGELLARVRVALRRHSGSQQESPLVSFSEITVDLINRRVLRNGEDLHLTPIE
FRLLAELLANSGKVITQRQLLSHVWGPNYVEHSHYLRIYMGHLRQKLEADPARPKHLLTETGVGYRFMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 3e-18 41
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 3e-18 41
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 1e-18 41
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 2e-18 41
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 3e-18 41
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 3e-18 41