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Name : M621_05725 (M621_05725) Accession : YP_008157976.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Virulence Product : fimbrial protein SteB Function : - COG functional category : - COG ID : - EC number : - Position : 1213342 - 1215831 bp Length : 2490 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : GTGTTAATTTCTTTCACACTGGCGGTGCAAGCGAACTGTGGTGTTGCTGCCGATATTGAATTTAATACCGACGTGCTGGA CGTAAAAGATCGCGCCAATATTGACTTGGGGCAGTTTTCTCGCAGTAACTTTATCATGCCCGGTGACTATATGTTTACCG TGCATATTAATAAACAAATATTAACCGATCAGCCGGTGGTGTTTTACCCGCCGGATGACGATGCCAAAGGCAGTGAAGCC TGTATTACGCCGCAGCTGGTGGAGCAACTGGGGCTGAAAGAAGCTGCGTTGCAAAAATTGACCTGGTGGCACCAAAACCA GTGTCTGGATCCCCGTAGCCTCAAGGGGATGGAGGCACGCGGCGATTTAGGCGCAGCGGCACTGTACCTGAATATTCCGC AGGCGTATCTGGAATACACCGCGGAGAATTGGGATCCACCTTCGCGTTGGGACGAGGGTATTCCGGGTTTGTTATTCGAC TACAACCTGAATGGCCAGACTCAGCGCCAGCAAAAGCAGGGCACGCAGAACTATAACCTCAGCGGCAACGGTACCCTGGG CGGCAATTTGGGGGCCTGGCGACTGCGGGCCGACTGGCAATCGCGGCTGGATCACCAGGGCGGTTCGGGCGAACCGACTC GCACCAGTTGGGACTGGAGCCGTTACTACGCTTACCGTGCGCTGCCGAAACTCGGTGCCAAGCTGACCGTAGGGGAGAAT TATCTGACCACCGACATTTTCTCCAGCTTCCGCTTCGCCGGTGCCAGCTTGGTGTCCGACGACAACATGTTGCCACCCAA CCTGCGCGGCTATGCACCTGAGGTGACCGGCGTGGCGCGCAGCAACGCCAAGGTGATTATTCGCCAGCAAGGGCGCGTGC TGTATGAAACCCAGGTGGCGGCGGGGCCGTTCCGCATTCAGGACATAAATAATGCAGTCAGCGGACAATTGGATGTGCGG GTGGAAGAGCAGGATGGCAGCGTGCAGGAGTTCCAGATGGATACCGCCAGCATCCCGTACCTGACTCGGCCCGGCTCGGT ACGTTACAAGGTGGCGGCCGGCCGGCCGGCGGACTGGGAGCACCACAGCAATGGGCCGATGTTCGGCACCGGCGAGTTTT CCTGGGGCGTGAGCAACGGCTGGTCGCTGTACGGCGGCGGCGTGGCGGGCGGCGATTACAACGCGCTGGCGCTGGGGGTG GGGCGTGACCTGATGATGTTCGGCGCGCTGTCGTTCGACGCTACCCAGTCACGCGCCAACCTGCCGCAACAGGGCACGCT GAGCGGCGGTTCATACCGCCTGAGCTATTCCAAGCGCTTTGACGACTATGACAGCCAGGTGACCTTTGCCGGCTACCGCT TCTCGGAGCGCAACTATATGTCGATGAGCGAATACCTGGATGCACGCACTTATGGCACGCGCAGCAACAGCAGCAAGGAG ATGTACACCATCAGCTTTAACCAGCAGTTCCGCGATCTGGGGTTGAGCGCCTATCTCAAATATAGCCACCAGACTTACTG GGACAGGCCGGTGAACGATAACTACAACCTGACGCTGGCGCGTTATTTCGATTTTGGGCGTTTCAGGAATATCAGCCTGT CGCTGACCGGCTATCGCAATAAATATAACGGCACCAACGACGACGGCATGTACCTGTCGCTGTCGCTGCCGTGGGGCAGC AATGGCTCGCTGAGCTACAGCGGCAGTTACAACCGCAACGATAACACCCATCAGGTGGGCTATTACGACCGGCTCAATGA GCGCGACACCTATCAGGTGAGCGCCGGTACTGCGCGCAGCGGCGCAACCGCCAGCGGCTACTACAGCCACAGCGGCGATC TCAGCCAGGTGAACGCCAGCGCCAGCTACCAGGCCGGGCAGTACAGCTCGCTGGGGCTGTCGATGCAGGGCGGCGCGACG GCCACCCTAAAAGGCGCGGCGTTGCACCGTAGCAGCATGAGCGGTGGCACCCGCATGTTGCTGGATACCGACGGCGTGCC GGGGATCCCGATCCGCGGTTATAGCGCACCTACCCTGAGTAACGCCTTCGGTAAAGCGGTGGTGGTGGACGTCGGCAGTT ACTACCGCAACCAGTTCAGTATCGACCTGAACGCGCTGCCGGAAAACGCCGACGTCAGCCAGACAGTGGCGCAGGCCACC CTGACCGAAGGCGCCATCGGCTACCGACGTTTTGAGGTAGTTTCCGGCGAGAAGGCGATGGCGGTGGTGCGGCTGGCGGA CGGCTCTGCCCCGCCGTTTGGCGCCACGGTGCGCAACGGCAAGCGGCAGGAGGTGGGCATTATCAATGACAACGGCGAAG TGTACCTGAGCGGTATCAAGGCTGGGGAAGCGATGAGCGTGAGCTGGGGCGGTGTGGAGCAGTGCGGCTTTACCCTGCCG CAGACGCTGTCGCCGAGCCAATTAACCAATCTGTTACTGCCTTGCGGCCCGGTGGCCAACGGCAAGGCGTTAAACACTGT TGAAGAGTAG Protein sequence : MLISFTLAVQANCGVAADIEFNTDVLDVKDRANIDLGQFSRSNFIMPGDYMFTVHINKQILTDQPVVFYPPDDDAKGSEA CITPQLVEQLGLKEAALQKLTWWHQNQCLDPRSLKGMEARGDLGAAALYLNIPQAYLEYTAENWDPPSRWDEGIPGLLFD YNLNGQTQRQQKQGTQNYNLSGNGTLGGNLGAWRLRADWQSRLDHQGGSGEPTRTSWDWSRYYAYRALPKLGAKLTVGEN YLTTDIFSSFRFAGASLVSDDNMLPPNLRGYAPEVTGVARSNAKVIIRQQGRVLYETQVAAGPFRIQDINNAVSGQLDVR VEEQDGSVQEFQMDTASIPYLTRPGSVRYKVAAGRPADWEHHSNGPMFGTGEFSWGVSNGWSLYGGGVAGGDYNALALGV GRDLMMFGALSFDATQSRANLPQQGTLSGGSYRLSYSKRFDDYDSQVTFAGYRFSERNYMSMSEYLDARTYGTRSNSSKE MYTISFNQQFRDLGLSAYLKYSHQTYWDRPVNDNYNLTLARYFDFGRFRNISLSLTGYRNKYNGTNDDGMYLSLSLPWGS NGSLSYSGSYNRNDNTHQVGYYDRLNERDTYQVSAGTARSGATASGYYSHSGDLSQVNASASYQAGQYSSLGLSMQGGAT ATLKGAALHRSSMSGGTRMLLDTDGVPGIPIRGYSAPTLSNAFGKAVVVDVGSYYRNQFSIDLNALPENADVSQTVAQAT LTEGAIGYRRFEVVSGEKAMAVVRLADGSAPPFGATVRNGKRQEVGIINDNGEVYLSGIKAGEAMSVSWGGVEQCGFTLP QTLSPSQLTNLLLPCGPVANGKALNTVEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 5e-172 | 50 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 1e-157 | 48 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 2e-156 | 48 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 3e-156 | 48 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 2e-157 | 48 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 2e-157 | 48 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 2e-157 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M621_05725 | YP_008157976.1 | fimbrial protein SteB | VFG1548 | Protein | 8e-158 | 48 |
| M621_05725 | YP_008157976.1 | fimbrial protein SteB | VFG0884 | Protein | 1e-157 | 48 |
| M621_05725 | YP_008157976.1 | fimbrial protein SteB | VFG0895 | Protein | 8e-158 | 48 |
