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Name : SCE1572_04945 (SCE1572_04945) Accession : YP_008147446.1 Strain : Sorangium cellulosum So0157-2 Genome accession: NC_021658 Putative virulence/resistance : Resistance Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 1401596 - 1402771 bp Length : 1176 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGCCCCGTTCGACCTCCTGGCCTCGCTGGCCATGGATGTCTATCTGCCGGTGGTGCCGAGCATGCCAGGCATCCTCGG CACGTCGCCGTCGGTCGTTCAGCTGACGTTGAGCCTCTACATGGTCGTCCTGGGCGCCGGACAGCTCGTGTTCGGGCCCA TCTCGGACCGGGTGGGCCGGCGGCCGGTCCTGCTCGGCGGCGCCGTCCTGTTTGCCGCCGCGTCGTACCTGCTCGCGGGC GCCGAGTCCGCCGCGGCGTTCGTCGCCCTCCGCGTCGTCCAGGCGCTGGGCGCGGCCGCGGCGCTGGTCGCGACCTTCGC GACGGTGCGGGACGTCTACGCGGAGCGCGCCGAGGGGGCGGTGATCTACAGCCTGTTCGGTTCGATGCTGGCGTTCGTGC CTGCGCTCGGGCCCGTGATCGGCGCGCTGCTCGCGGACCACCTCGGCTGGCGGGCGATCTTCGTCGCGCTCGGCGCCGCC GCCACCGCGGCCGCGCTGAACGCGGCGCCGAGGTGGCGCGAGACCCGGCCGGTGAACGCGTCGAGGCCGCGCGCCGCGTT CGGCGAGATCCTGACGGACGCCTCGTTCTGGACCTACACGCTCGGCTTCAGCGCGGCCATGGGCGCGTTCTTCGTCTTCT TCTCGACGGTGTCGCGCGTCCTGATCGATCGGGCAGGCTTCTCGCAGCTCACCTTCAGCCTCCTGTTTGCCACCGTCGCG CTCGTCATGATCGCGACGACCCGGTTCGCGAAGCGGTTCGTCGCGCGGTGGGGGAGGGCCGGGAGCCTCGTCCGCGGGAT GGGGATGCTGCTCCTCGGAGCCGCGCTGCTGGCCGTCGGGCAGGGGATCGCCGCCCCGTCGTTCTGGACCTTCGTCCCGC CCATGTGGATCATCGCGATCGGCATCGTCTTCGCGAATTCGGTGGCGGCCAACGGTGCGCTCCAGCGCTTCGGTCACGTC GCCGGCACCGCGACCGCGCTCTACTACTGCATCGAGAGCCTCGTCGTGGGGATCGTCGGAACGACGCTCGTCGTCCTGCT GCCCGGGGACACGGCATGGCCGCTCTCGGCCTATTGCACGCTCATGGCCGTGGTCGTGCTGGGCCTCGTCCGGCGCGTGG AGAGGTCCCCGGCGGCCGCCGTCTCGCCGGATCCGGCGCGCGCTCGCGAGACGTAA Protein sequence : MAPFDLLASLAMDVYLPVVPSMPGILGTSPSVVQLTLSLYMVVLGAGQLVFGPISDRVGRRPVLLGGAVLFAAASYLLAG AESAAAFVALRVVQALGAAAALVATFATVRDVYAERAEGAVIYSLFGSMLAFVPALGPVIGALLADHLGWRAIFVALGAA ATAAALNAAPRWRETRPVNASRPRAAFGEILTDASFWTYTLGFSAAMGAFFVFFSTVSRVLIDRAGFSQLTFSLLFATVA LVMIATTRFAKRFVARWGRAGSLVRGMGMLLLGAALLAVGQGIAAPSFWTFVPPMWIIAIGIVFANSVAANGALQRFGHV AGTATALYYCIESLVVGIVGTTLVVLLPGDTAWPLSAYCTLMAVVVLGLVRRVERSPAAAVSPDPARARET |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cmlA9 | ABZ01840.1 | CmlA9 chloramphenicol efflux protein | Not tested | SGI2 | Protein | 1e-80 | 64 |
| cmlA | CAJ77032.1 | chloramphenicol and florfenicol resistance protein | Not tested | AbaR1 | Protein | 1e-80 | 64 |
| flo | AAK02049.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 2e-79 | 63 |
| floRc | AGK06972.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 2e-79 | 63 |
| floRc | AGK07102.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 2e-79 | 63 |
| floR | YP_005176183.1 | florfenicol / chloramphenicol efflux protein | Not tested | ICEPmu1 | Protein | 3e-78 | 62 |
| cml(A)5 | ACY75522.1 | CmLA(5) | Not tested | Tn6060 | Protein | 1e-58 | 53 |
| cmlA5 | CAJ77046.1 | Chloramphenicol resistance protein | Not tested | AbaR1 | Protein | 2e-58 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCE1572_04945 | YP_008147446.1 | hypothetical protein | DQ984668.gene.p01 | Protein | 9e-59 | 53 |
| SCE1572_04945 | YP_008147446.1 | hypothetical protein | AF294653.1.gene4.p01 | Protein | 8e-59 | 53 |
| SCE1572_04945 | YP_008147446.1 | hypothetical protein | DQ522237.1.gene4.p01 | Protein | 9e-59 | 53 |
| SCE1572_04945 | YP_008147446.1 | hypothetical protein | NC_010410.6003586.p0 | Protein | 9e-59 | 53 |
| SCE1572_04945 | YP_008147446.1 | hypothetical protein | AF156486.gene.p01 | Protein | 2e-57 | 53 |
