Gene Information

Name : SCE1572_47500 (SCE1572_47500)
Accession : YP_008155844.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : protein disaggregation chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 13348071 - 13350680 bp
Length : 2610 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGAATCGAGCGAATGACGACGAAGGCCCAGGAGGCCATACGAGAGGCTGTCGATTTCGGCAGCCGCCGGGGAAATCC
CGAACTCTATCCCGAGCACATCGTGCGGGCGATCGTCGGCCAGGACGGCGGCGTCGGCGCTCCGCTGGTGCAGAAGGCAG
GCGCAGATCCCGCGGGGCTGTTGCGCCTGCTCGACGCGAAGATCGACACCTACCCTCGCGTGAGCGGAGGCGCCGAGCCG
AACCTGTCGCGGCGCGCGCTCGCGGTCCTGCAGAAGGCCGAAGACGAGGCGAAGGCGCTCAAGGACGAGTACATCTCGAC
AGAGCACGTCCTGCTCGCCGGGACGAAGACCGACAAGGAGATCCAGTCGATCTTCGAACGAGCGGGCCTGTCGTACGACA
AGCTCCTCGCGTCGCTCGCGGCCGTGCGCGGCAATCAGCGCGTGACGGACCGGGACCCCGAGGGGAAGTTCCAGGCGCTC
GAGAAGTACACCCGCGATCTCACGAAGCTCGCCCGACAGGGCAAGATCGACCCGGTGATCGGTCGAGACGAGGAGATCCG
GCGCGTGATCCAGGTGCTCTCGCGCCGGACCAAGAACAACCCGGTGCTCATCGGTGAGCCCGGCGTCGGCAAGACGGCCA
TCGTCGAGGGCCTCGCGCACCGCATCGTCGCGGGCGACGTGCCCGAGTCGCTCAAGGACAAGACCATCGCCGCGCTCGAC
CTCGCCGCCATGGTCGCAGGCTCGAAGTTCCGCGGCGAGTTCGAGGACCGGCTGAAGGCGGTGCTCAAGGAGATCGAGGG
CTCGAACGGGCGCATCATCCTGTTCATCGACGAGCTCCACACGCTGGTCGGCGCCGGCGCGGCCGAGGGCGCCATGGACG
CGGCCAACATGCTGAAGCCCGCGCTCGCGCGCGGCGAGCTCCGGTGCATCGGCGCGACCACCCTCGACGAGTACCGGAAG
CGGATCGAGAAGGACGCGGCGCTGGAGCGGCGCTTCCAGCAGGTGCTCGTCGCGCAGCCCACCGTCGAGGACACGATCGC
CATCCTGCGCGGCCTGAAGGAGAAGTACGAGGTCCACCACGGCATCCGCATCCAGGACGCCGCGCTCGTGGGCGCCGCGG
TGCTGTCGAACCGGTACATCACCGAGCGGTTCCTGCCCGACAAGGCGATCGACCTCATCGACGAGGCGGCGTCGAAGATC
CGCATGGAGATCGACAGCCTGCCCACGCCCATCGACCAGGTGGAGCGCGATCTGCTCAAGCTGCAGATGGAGGAGCAGGC
GCTCAAGCGCGAGAGCGACAAGGCGAGCAAGGCGCGCCTCGACGAGGTGCGGCGCGAGATCGCCGAGCTCCAGGGGCAGC
GCGACGCGATGCGGGCGCAGTGGATGCGGGAGAAGGAGCTCATCTCCGAGCTGCGCCAGCTCAAGCCGCAGATCGAGGAG
CTCAGGCTCGAGGAGGAGCGCCTGAAGCGCGCCGGCGATCTCGGGCGCGCCGCGGAGATCCATTACGGCAAGATCCCGGA
GATCGAGAAGAAGCTCGAGTCGATCCGCACGACCCTCGCCCAGGTGCAGTCGAAGCAAAGCTACCTGAAGGAGGAGGTCA
CCGACGAGGACATCGCCGCGGTCGTCTCGAAGTGGACCGGTATCCCGGTGTCCAAGATGCTCGAGAGCGAGATGCAGAAG
CTCCTGCGCCTCGAGGAGGAGCTGCGGCGGCGCGTCGTCGGGCAAGAGGACGCGCTCCGCGCGGTGTCGAACGCCATCCG
GCGCTCGAGGGCCGGCCTCGGCGACGAGCGGCGGCCGATCGGGTCGTTCCTGTTCCTCGGGCCGACCGGCGTCGGCAAGA
CCGAGCTCGCGCGCGCGCTCGCCGAGATCCTCTTCGACGACGAGCGGGCCATGGTGCGGCTCGACATGAGCGAGTACGGG
GAGCGGCACGCGGTGGCCCGCCTGATCGGCGCGCCGCCCGGGTACGTCGGCTACGAGGAGGGCGGCCAGCTCACGGAGCC
GGTGCGCCGGCGGCCGTACAGCGTGGTGCTGTTCGACGAGATCGAGAAGGCGCACCCGGACATCTGGAACACGCTCCTCC
AGGTGCTCGACGACGGGCGCCTGACCGATGGACAGGGGCACACGGTCGATTTCAAGAACACGATCATCATCCTGACATCC
AACCTCGGGACGCCCGCGGCCGCGGCGATCGAGGAGCGGGCGAACCTGCCGGCCGACGAGAAGGCCGAGCTCGTGCGGAG
GGCCGTCATCGAGGAGGTGCGGAAGCACTTCCGCCCGGAGTTCTTGAATCGCCTCGACGACCTCATCGTGTTCCGGCGGC
TGGCGCGCGAGCAGATGGAGAAGATCGTGGACATCCAGCTCGATCTGCTGCGAAAGCGCCTGGATCGACGCGGGCTCCTG
TTCACCATCTCGTCCGACGCGAAGGGCTACCTCATCGAGCAGGGGTGGGACCCGCAGTACGGCGCGAGGCCGCTGAAGCG
CGCCATCCAGCGGAGCATCGAGGACGAGCTCGCGAAGCGGATCCTCGGCGGGGAGTTCAAGCAGGGCGACACGGTGCGGA
TCGACCGCGGGGACGGCGCGCTCACGTTCACGCGCGCCGCGCCGAACTGA

Protein sequence :
MRIERMTTKAQEAIREAVDFGSRRGNPELYPEHIVRAIVGQDGGVGAPLVQKAGADPAGLLRLLDAKIDTYPRVSGGAEP
NLSRRALAVLQKAEDEAKALKDEYISTEHVLLAGTKTDKEIQSIFERAGLSYDKLLASLAAVRGNQRVTDRDPEGKFQAL
EKYTRDLTKLARQGKIDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAHRIVAGDVPESLKDKTIAALD
LAAMVAGSKFRGEFEDRLKAVLKEIEGSNGRIILFIDELHTLVGAGAAEGAMDAANMLKPALARGELRCIGATTLDEYRK
RIEKDAALERRFQQVLVAQPTVEDTIAILRGLKEKYEVHHGIRIQDAALVGAAVLSNRYITERFLPDKAIDLIDEAASKI
RMEIDSLPTPIDQVERDLLKLQMEEQALKRESDKASKARLDEVRREIAELQGQRDAMRAQWMREKELISELRQLKPQIEE
LRLEEERLKRAGDLGRAAEIHYGKIPEIEKKLESIRTTLAQVQSKQSYLKEEVTDEDIAAVVSKWTGIPVSKMLESEMQK
LLRLEEELRRRVVGQEDALRAVSNAIRRSRAGLGDERRPIGSFLFLGPTGVGKTELARALAEILFDDERAMVRLDMSEYG
ERHAVARLIGAPPGYVGYEEGGQLTEPVRRRPYSVVLFDEIEKAHPDIWNTLLQVLDDGRLTDGQGHTVDFKNTIIILTS
NLGTPAAAAIEERANLPADEKAELVRRAVIEEVRKHFRPEFLNRLDDLIVFRRLAREQMEKIVDIQLDLLRKRLDRRGLL
FTISSDAKGYLIEQGWDPQYGARPLKRAIQRSIEDELAKRILGGEFKQGDTVRIDRGDGALTFTRAAPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 8e-101 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_47500 YP_008155844.1 protein disaggregation chaperone VFG2076 Protein 3e-114 44