Gene Information

Name : SCE1572_46850 (SCE1572_46850)
Accession : YP_008155717.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 13168868 - 13170040 bp
Length : 1173 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCACCTCACCACCGATCAAGGGATCCCCCTCTCCCATACCGACGACTCGTTGAGGCCAGGCCCGCGCGGCCCGACGCT
CCTCGAGGACTTTCACTTCCGCGAGAAACTAACCCGCTTCGACCACGAGCGGATCCCGGAGCGCGTCGTCCACGCGCGCG
GATCCGGCGCTCACGGCTACTTCCAGGTGTACGAGCCGCTGACGAGGTACACGAAGGCCAAATTCCTCCAGGACCCGTCG
ATCAAGACCCCGGTGTTCGTGCGGTTCTCCACCGTCGCCGGCTCGCGCGGCTCCGCGGACACGGTGCGCGACGTGCGCGG
GTTCGCCGTGAAATTCTACACGCAGGAGGGGAATTTCGATCTCGTCGGCAACAACATGCCCGTCTTCTTCATCCAGGACG
GCATCAAGTTCCCGGACGTGGTGCACGCGGTCAAGCCCGAGCCGCACCACGAGATGCCTCAGGCCGCCTCGGCGCACGAC
TCGTTCTGGGACTTCGTGTCGCTGGTGCCGGAGACTGCCCACATGGTCATGTGGGTCATGTCCGATCGCGCCCTGCCGCG
GAGCTACCGCATGATGGAGGGCTTCGGCGTGCACACCTTCCGCTTCATCAACGCCGAAGGCAAATCGCGCTTCGTCAAGT
TCCACTGGAAGCCGCTCCTCGGCGTCCACTCGCTGGTCTGGGACGAGGCGCAGAAGCTCGCGGGCAAGGACCCGGACTTC
CACCGCCGCGACCTCTGGGAGGCGATCGAGATGGGCGACCCTCCCGAGTACGAGCTCGGCGTCCAGATCATCGAGGAAGA
GCAGGCGGACACGCTGGGCTTCGACCTCTTCGACGCGACGAAGCTCGTCCCGGAGGAGGTCGTCCCGGTGAAGCGCGTCG
GCAAGCTCGTGCTCCACCGCAACCCGACCAACTTCTTCGCCGAGACGGAGCAGGTCGCCTTCTGCGTACAGAACGTCGTG
CCCGGGATCGATTTCACGAACGACCCGCTCATGCAGGCGCGGCTCTTCTCGTACCTCGACACCCAGCTCACCCGGCTCGG
CGGGCCGAACTTCGCGGAGATCCCCATCAACCGGCCGCTCGCGCCCGTGCACAACCACCAGCAGGACGGCTTCCACCGGC
ACACCATCGACGCAGGGCGGGCCAACTACCACCCCCAGGCCATCCCCGCCTGA

Protein sequence :
MHLTTDQGIPLSHTDDSLRPGPRGPTLLEDFHFREKLTRFDHERIPERVVHARGSGAHGYFQVYEPLTRYTKAKFLQDPS
IKTPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTQEGNFDLVGNNMPVFFIQDGIKFPDVVHAVKPEPHHEMPQAASAHD
SFWDFVSLVPETAHMVMWVMSDRALPRSYRMMEGFGVHTFRFINAEGKSRFVKFHWKPLLGVHSLVWDEAQKLAGKDPDF
HRRDLWEAIEMGDPPEYELGVQIIEEEQADTLGFDLFDATKLVPEEVVPVKRVGKLVLHRNPTNFFAETEQVAFCVQNVV
PGIDFTNDPLMQARLFSYLDTQLTRLGGPNFAEIPINRPLAPVHNHQQDGFHRHTIDAGRANYHPQAIPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 4e-71 46
katA YP_005126717.1 catalase Not tested Not named Protein 3e-67 45
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 3e-65 45
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 3e-65 45
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 3e-65 45
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 3e-65 45