|
Name : SCE1572_45975 (SCE1572_45975) Accession : YP_008155543.1 Strain : Sorangium cellulosum So0157-2 Genome accession: NC_021658 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.8.1.4 Position : 12921457 - 12922863 bp Length : 1407 bp Strand : - Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAGACCTACGACGCAATCGTGATCGGTGCCGGCCCGGGCGGTTACCCCTGCGCCATCCGGCTGGCTCAGCTCAAGCA GACGACGCTCTGCATCGAGAAGGAGCAGCCCGGCGGCGTCTGCCTCAACTGGGGGTGTATCCCCTCCAAGGCGCTGATCT CCGCCGCCCACCTCTACGAGAAGTCGCAGGCCGGCGCCTCGATGGGGATCAAGGTCAGCGGCGTCGAGCTCGACGCCAAC GCGATGCAGGACTGGAAGGAAGGCATCGTCAAGAAGCTCACCGGCGGCGTCCGGTCGCTGCTCAAGGGCAACGGCGCCGA CCTGATGACCGGCACCGCCACGATCGTCGGGCCGAAGCGCGTGGACGTGACCCTGCCGGACGGCTCGGTGGAGCAGATCG AGGCGAAGAAGGCGATCGTCATCGCCACCGGCTCGACCACGATCGAGATCCCGTCGTTCAAGTTCGACGGCCAGTCGATC ATCGGCGCGAAGGAGGCGGTGAGCCTGCGCCAGATCCCGAAGCGGCTGATGGTGATCGGCGGCGGCGTCATCGGCCTCGA GCTCGGCATGGTCTACCAGGCCTTCGGCTCGCAGCTCACCGTGGTCGAGGCGCTGCCCGACCTGCTCACGGGCGTCGACC CCGACTGCACAAAGATCGTCGAGCGCAAGATCCTGAAGCGCGGCGGCACGATCCACAAGAACGCCAAGGCGATCGGCTAC GAGAAGCAGAAGGACGGCTCGGTCGGGGTGAAGATCCAGATCGAGGGCAAGGAGCAGACGATCGTCGTCGACACGGTGCT CGTCGCCGTCGGCATGCGGCCGACCTCGAAGGGGCTCGGCCTCGAGAAGGTCGGCGTGACGGTCGATCAGCGCGGGTTCA TCCCGACCGACAAGACGTGCCGCACCAACGTGCCGTCGATCTACGCGATCGGCGACGTCAGCGGCCCGCCCCTGCTCGCG CACAAGGCGACGAAGGAGGGCGAGATCGTCGCGGAGGTCATCGCGGGGCACAAGGCCGCGAAGGACTGGGTCGCGATCCC GGGCGCGATCTTCACCGATCCGGAGATCGCGACGGTGGGGCTCACCGAGGCGGAGGCGAAGGCGAAGGGCCTCGAGGTCA GCGTCGGCAAGTTCCCGTTCTCGGCGCTCGGCAAGGCCATGGCCCTGAACGAGACCGAGGGGTTCGTGAAGATCGTCGCC GACAAGAAGACGAAGCAGGTGCTCGGCGTCCACATCGTCGGCCCGGAGGCGAGCACGATGATCAGCGAGGCGTCCCTGTC GCTCGAGATGGCGGCCTTCCTCGAGGACCTCTCGCTCACGATCCACCCCCACCCGACCCTCGGCGAGTCGCTGATGGAAG CCGCCGCCCACGCCATGGGCGCGGCGATCCACATCGCGAACCGCTGA Protein sequence : MKTYDAIVIGAGPGGYPCAIRLAQLKQTTLCIEKEQPGGVCLNWGCIPSKALISAAHLYEKSQAGASMGIKVSGVELDAN AMQDWKEGIVKKLTGGVRSLLKGNGADLMTGTATIVGPKRVDVTLPDGSVEQIEAKKAIVIATGSTTIEIPSFKFDGQSI IGAKEAVSLRQIPKRLMVIGGGVIGLELGMVYQAFGSQLTVVEALPDLLTGVDPDCTKIVERKILKRGGTIHKNAKAIGY EKQKDGSVGVKIQIEGKEQTIVVDTVLVAVGMRPTSKGLGLEKVGVTVDQRGFIPTDKTCRTNVPSIYAIGDVSGPPLLA HKATKEGEIVAEVIAGHKAAKDWVAIPGAIFTDPEIATVGLTEAEAKAKGLEVSVGKFPFSALGKAMALNETEGFVKIVA DKKTKQVLGVHIVGPEASTMISEASLSLEMAAFLEDLSLTIHPHPTLGESLMEAAAHAMGAAIHIANR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 5e-89 | 47 |
