Gene Information

Name : SCE1572_43425 (SCE1572_43425)
Accession : YP_008155036.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 12226967 - 12228346 bp
Length : 1380 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAACACGTCTCATCAACGGCACTACTTCGAGCGCAACGTCTCGATCAGCGCGGACCCCATCGACCTGGCGGCGGCGCT
CGCAAAATCAGGCCTGCACACGACGTACTTCGTGTACGAGCGCGACGGCGAGTGGAGCGTCGCCCTCGGCGCAGCCTTCG
AGCTCACGGCCGACGTACACGGCGTGCACCGCCTCGATCGGACAGGGAAGCAGAGCTGGACCGGCGGGGATTGCCTCGCC
GCGGTCGAGGCGGCGCTCGCGTCGATGCCGCTCCGGGGCTGGCGCGCGTACGGCACCGCCTCGTTCGAGTTCGCGTACCT
GCTGCACGGCATCGAGGCGAATCTCGGCGCAGAGCCCTTGCTCCACCTGACCATCCCGGAGGTCGAAATCCGCCTGCGGC
GCGGTACGGCGCTGCTTCGCGCGCTGACCTCGGACGAACTCGAGAGGATGGTGGACGTCCTCGCGTCCTCGGACCGCCGT
CACGCGCGCGAGATGACGGACGTCGCCGGTCTCCACCCGGTCCCCTCGCCTCTGGTGCTTCCCATCACGGTGCTCGAGAC
GACGGGCGCAGCGAAGTACAAGGAGCTGGTGGCTGCAGCTACCCATGAGATCGCGGCGCGCAAGCTCCACAAGGTGATCG
CGTCGCGCGTCGTCCCGATTTCCGCACCCGTCGACCTGATCGCTACCTACGTCGCCGGGCGGCGCCAGAACACCCCTGCC
CGATCGTTCGTGGTCAACTGCCGCGATCTGAAGTTCGCCGGATTCAGCCCCGAGACGGTGCTCGAGGTGACCGCCGAGGG
GCAGGTCATGACACAGCCGCTCGCCGGGACCCGGGCGCTCGTCTCGGACGACAATGAAAACGCGCGCCTGCGAGCGGAGC
TGCTCAGCGACTCGAAGGAGCTGGCCGAGCACGCGATGTCGGTGAAGCTGGCGTTCGAGGAGCTCAGCCGCGTCTGCAAG
CAGGGAAGCGTGACCGTGAACGAGTTCATGGCGGTGTCGCGTCGCGGAACCGTTCAGCACCTCGCCTCACGGCTCTCGGG
CATGCTCGAGGCGGGCAACTCGGCGTGGACGGCGTTCCAGGTGCTGTTCCCTGCCATCACCGCGTCGGGGATCCCCAAGA
GGGAGGCGGTCGACTGGATTCGAAGGCACGAAGCGGAGAGCCGCGGCCTCTACTCAGGCGCGGTCCTGACGGTGGACCAC
GACGGAGCGATGGATGCAGCGCTCGTGCTGCGAACCATCTTCCAGCGGGGGAGCAGCGTGTGGCTCCGGGCGGGCGCCGG
GATCGTAGCGCAGTCGACGCCCGAGCGAGAGCTGGAGGAGACCTGCGAGAAGCTCCAGAGCGTGGCGCGCCACCTGGTGC
CGTCAGGGGTCGCCAGCTAG

Protein sequence :
MNTSHQRHYFERNVSISADPIDLAAALAKSGLHTTYFVYERDGEWSVALGAAFELTADVHGVHRLDRTGKQSWTGGDCLA
AVEAALASMPLRGWRAYGTASFEFAYLLHGIEANLGAEPLLHLTIPEVEIRLRRGTALLRALTSDELERMVDVLASSDRR
HAREMTDVAGLHPVPSPLVLPITVLETTGAAKYKELVAAATHEIAARKLHKVIASRVVPISAPVDLIATYVAGRRQNTPA
RSFVVNCRDLKFAGFSPETVLEVTAEGQVMTQPLAGTRALVSDDNENARLRAELLSDSKELAEHAMSVKLAFEELSRVCK
QGSVTVNEFMAVSRRGTVQHLASRLSGMLEAGNSAWTAFQVLFPAITASGIPKREAVDWIRRHEAESRGLYSGAVLTVDH
DGAMDAALVLRTIFQRGSSVWLRAGAGIVAQSTPERELEETCEKLQSVARHLVPSGVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtS YP_002346907.1 salicylate synthase Irp9 Not tested HPI Protein 2e-57 42
ybtS NP_669701.1 salicylate synthase Irp9 Not tested HPI Protein 2e-57 42
ybtS YP_070129.1 salicylate synthase Irp9 Not tested HPI Protein 2e-57 42
ybtS CAA21385.1 - Virulence HPI Protein 2e-57 42
irp9 CAB46570.1 salicylate synthetase, Irp9 Virulence HPI Protein 1e-56 42
irp9 YP_001006810.1 salicylate synthase Irp9 Not tested HPI Protein 8e-57 42
ybtS NP_993012.1 salicylate synthase Irp9 Not tested HPI Protein 7e-57 42
APECO1_1052 YP_853070.1 salicylate synthase Irp9 Not tested PAI IV APEC-O1 Protein 2e-57 42