Gene Information

Name : SCE1572_39385 (SCE1572_39385)
Accession : YP_008154241.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Resistance
Product : macrolide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 11124187 - 11124885 bp
Length : 699 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGACCGAGGGGTATCGCGACGGGAAGCCGAAGCCCATTGTCGAGCTGCAAGGGGTCGGCAAGACCTATTTCCGCGACAA
GGAGCCGATCGTGGTGCTCGACGACATCACGCTCGATGTCCCGGAGGGGTCGTACGAGGCGCTGATGGGTCCCTCGGGCT
CGGGCAAGTCGACGCTCCTGAACCTCATCGCCGGGCTCGATCGCCCGACGCGCGGCACGGCGCGCGTGGCGGGGCAGGAG
CTCACGCGGATGAGCGACGGCGAGCTGGCGCGCTTCCGGTCGAGGACGATGGGGTTCATCTTCCAGGCCTACAACCTGAT
GCCGGTCCTCACCGCGGCCGAGAACGTCGAGCTGCCGCTCCTGCTCACGAACCTCTCGGCGTCCGAGCGGCGGAAGCGCG
CGCAGACGGCGCTGCGCGTGGTCGGGCTGGAGGAGCGGATGGGCCATTATCCGCGGCAGCTCTCCGGCGGCCAGGAGCAG
CGGGTGGCGATCGCGCGGGCGATCGTGAACGACCCGACGATCATCGTGGCGGACGAGCCGACCGGCGATCTCGATCGGAA
GAGCGCCGACGAGATCCTGACGCTCCTGGAGAAGCTCAACAAGGAGTTCAAGAAGACCATCCTGATGGTCACGCACGACC
CGCAAGCCGCCGAGCGCGCCACGGTGACGCGCCGGCTCGACAAGGGGAACCTGTCATGA

Protein sequence : 
MTEGYRDGKPKPIVELQGVGKTYFRDKEPIVVLDDITLDVPEGSYEALMGPSGSGKSTLLNLIAGLDRPTRGTARVAGQE
LTRMSDGELARFRSRTMGFIFQAYNLMPVLTAAENVELPLLLTNLSASERRKRAQTALRVVGLEERMGHYPRQLSGGQEQ
RVAIARAIVNDPTIIVADEPTGDLDRKSADEILTLLEKLNKEFKKTILMVTHDPQAAERATVTRRLDKGNLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_39385 YP_008154241.1 macrolide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-44 50
SCE1572_39385 YP_008154241.1 macrolide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-41 49
SCE1572_39385 YP_008154241.1 macrolide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-42 43
SCE1572_39385 YP_008154241.1 macrolide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-41 42