Gene Information

Name : SCE1572_03940 (SCE1572_03940)
Accession : YP_008147247.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1118925 - 1119944 bp
Length : 1020 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGTCACACGGCGTAAATCGACAATGGCGCCTGGCGACACGCCCCACTGGTCCTATCGACGACCACATTTTCCGGTGGGT
AGAGGAGCCTAGCCCCGCGCTCACGGCAGACGGCCAGATCCTGGTCCGCAATCTCTACCTGTCGATCGACCCTACCCAGC
GCGAATGGATCGCGCACGACACCTACCTCCCTGCTGTCCGTATCGGCGACGTCATGCGCTCTCTCTCGGTGGCGCGTGTC
GAGGAGTCGAGGCACCCGGGCTATGCTCGCGGCGATCTGGTGCAAGGTCTGTTCGGCTGGCAGGATTACGCGCTGGTGGA
CGCCGCGGTCCCTGGCGGGTCGACCAAGCTCCCTCCGGGCATGCCGATCACGCGGGCGTTGAGCACGCTCGGGCTCACCG
GGCTCACCGCGTACTTCGGCTTGCTCGATGTTGGACGCCTCATGGAGGGCGAGACGGTGGTCGTCTCCGGCGCAGCCGGC
GCGACGGGGTCGGTCGCCGGGCAGATCGCCAAGATCAAGCGGTGCCGCGTCATCGGCATCGCGGGCGGCGCCGAGAAATG
CGCATGGCTCACGCGAGAGGCTGGCTTCGATGCGGCCATCGACTACAAGTCCGAGAACGTCCGCGCCCGTCTCCGGGAGC
TCTGCCCCAAGGCCGTCGATGTCTACTTCGACAACGTGGGCGGCGCCATCCTCGATGCCGCCCTCGCGGAGCTCGCCTTT
CGGGGGCGAGTGGTGCTCTGCGGCGCCATCTCGAGCTACGGGGCGAGGGAGTTGCCGAGTGGGCCGAAGAACTACCTCAA
CCTTATTCTGCAGCGCGGCAGGATGGAAGGGTTCGTCATCATCGACTATGTAAAGCGCTTCGGTGAGGCGGTGAGGGACC
TGAGCGCCTGGATAGCGACTGGGCAGATCAAGGACCAGGTCGATGTCCAGGAGGGGCTGGAGAACGCCCCGCAAGCGCTG
CGCCGCCTGTTCTCGGGGGAAAACCGGGGCAAGCAGCTCGTGAAGATCGCCGATCCCTGA

Protein sequence :
MSHGVNRQWRLATRPTGPIDDHIFRWVEEPSPALTADGQILVRNLYLSIDPTQREWIAHDTYLPAVRIGDVMRSLSVARV
EESRHPGYARGDLVQGLFGWQDYALVDAAVPGGSTKLPPGMPITRALSTLGLTGLTAYFGLLDVGRLMEGETVVVSGAAG
ATGSVAGQIAKIKRCRVIGIAGGAEKCAWLTREAGFDAAIDYKSENVRARLRELCPKAVDVYFDNVGGAILDAALAELAF
RGRVVLCGAISSYGARELPSGPKNYLNLILQRGRMEGFVIIDYVKRFGEAVRDLSAWIATGQIKDQVDVQEGLENAPQAL
RRLFSGENRGKQLVKIADP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 1e-46 41