Gene Information

Name : SCE1572_33995 (SCE1572_33995)
Accession : YP_008153172.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9671472 - 9671966 bp
Length : 495 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGCTCAGACCAAGTTCAAGGGAAGCCCCGTCCACACCGCCGGCGAGCTGCCGTCCGTCGGCGCGACCGCACCCGAGTT
CACGCTCGTGAAGAGCGATCTGTCGGAAGGCAAGCTCTCGTCGTATTCGGGCAAGAAGATCCTCAACATCTTTCCGAGCG
TCGACACCGGCGTCTGCGCGAAATCCGTTCGGACGTTCCACGAGCGCGCCGCGCAGCTCCCGGGCGTGACGGTGCTCAAC
ATCTCGGCCGATCTGCCGTTCGCGCACGGCCGCTTCTGCGGGGCCGAGGGCATCAAGAACGCGGAGAGCCTCTCGACCTT
CCGGGGCGATTTCGGCGACAAGTACGGCGTCAAGCTGGTGGACGGGCCGCTCGCCGGCCTGCTCGCGCGCGCGGTCCTCG
TGCTCGACGAACAGAACAAGGTCGTCCACGCGGAGCTCGTCCCGGAGATCGCGCAGGAGCCCGACTACGACGCGGCCCTC
GCCAAGGTGCGGTGA

Protein sequence : 
MAQTKFKGSPVHTAGELPSVGATAPEFTLVKSDLSEGKLSSYSGKKILNIFPSVDTGVCAKSVRTFHERAAQLPGVTVLN
ISADLPFAHGRFCGAEGIKNAESLSTFRGDFGDKYGVKLVDGPLAGLLARAVLVLDEQNKVVHAELVPEIAQEPDYDAAL
AKVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-25 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-25 44
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-25 44
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-25 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_33995 YP_008153172.1 thiol peroxidase VFG0087 Protein 8e-26 44