Gene Information

Name : SCE1572_31300 (SCE1572_31300)
Accession : YP_008152646.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8902706 - 8904181 bp
Length : 1476 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAGCCCTGCCCGAAAGCCCCACGTGGTCATCGTCGACGACGAGCCGCACCTCTGCGAGCTGCTCGCCTTCCGCCTCGA
GCACCACGGCTACCGGGTCACCACGGAGCTGACCGGCGCCGGGGGCATCGCCGCCCTCTCCCGCGAGCCCGTCGACGCGA
TGATCGTCGACCTCCGCCTCGACGACTGCGACGGGCTCGACGTGCTCAGCGAGGTGCAGAAGCGCTCCCCCGACGTGCCC
GTCGTCATCCTCACGGCCCACGGCACCATCGAGATCGCCGTCGAGGCGATGAGGCGGGGCGCGTACGGCTTCCTCACGAA
GCCGTTCCACGACCTCGATCTGCTCCAGAAGCTCGCGCACGCGGTCGAGAGCAGCTCGCTCCGCCGCGAGGTCGCCGGCC
TGCGCCGCATCATCGGCGCCCAGAGCGACGAGCTGCGCCTGCTCGGGACGAGCGACCGCATCGCCGCCGTCCGCGAGATC
ATCTCCCGCGTCGCCCCCACCGACGCCACCGTCCTTTTGCTCGGCGAGTCCGGCACCGGCAAGGAGCTCGCGGCGCGCTC
GCTCCACGCCCTCTCGCAGCGCCGCGGCAAGCCGTTCGTCGCGGTCAACTGCAGCGCCCTGCCGGCCGAGCTCCTGGAGA
GCGAGCTGTTCGGCTACGTGCGCGGCGCGTTCACCGGCGCCACGCGCGACAAGGAGGGCCTCTTCGCCTCCGCCAACGGG
GGCACCCTCCTGCTCGACGAGATCGGCGACGCCCCTCCCGCGGTCCAGGTGAAGCTCCTCCGCGTGCTGCAGGAGCGCCG
CATCACCCGCGTCGGCTCGCTCAACGAGGAAGAGGTCGACGTCCGCGTCGTCGCCGCGACCAACCGCGATCTCCTCACCG
AGGTCCGCGACGGCCGCTTCCGCGAGGATCTCTTCTATCGCCTGCACGTCGTCCCCATCGTCATGCCCCCGCTCCGCGAG
CGGGTGGAGGACCTCCCCCTGCTCTGCGAGGTGTTCCTCTCCCGCGCCGCGGCCCGCCACGGCCTCTCCGAGCCCAAGCT
CACCCCCGAGGCCCTGCGCGTGCTCCTCGCGCACCCCTGGCCCGGCAACGTCCGCGAGCTCGCCAACGTCATGGAAGGCG
CCGTCCTGCTCTGCCGCGGCGAGCGCCTGCAGCCGCAGGACCTCAGCACCCTCCTCGTCCCCCCCGCCCGCAAGCTCGAC
GGCTGGTCGAGCGGCGCGGAGCCCGAGGACGCCGAGGCCCCGGCCATCTCGGACGCCGCGGGTGAGATCCTGTCGGTGGC
CTTCGGCGACCCCGGCTCGGCGCTCCCGTCGCTCAAGGAGGCGCGCGACACGTTCGAGCGCGCCTACCTGGTCGAGGTGC
TCCGCCGCGCCAACGGCAACGTCAGCGCCGCCGCGAAGCTCTCCGGCAGGAACCGGACGGACTTCTACGACCTCCTCCGC
AAGCACGGCCTCTCCTCCGCCAGCTTCAAGGAGTGA

Protein sequence : 
MSPARKPHVVIVDDEPHLCELLAFRLEHHGYRVTTELTGAGGIAALSREPVDAMIVDLRLDDCDGLDVLSEVQKRSPDVP
VVILTAHGTIEIAVEAMRRGAYGFLTKPFHDLDLLQKLAHAVESSSLRREVAGLRRIIGAQSDELRLLGTSDRIAAVREI
ISRVAPTDATVLLLGESGTGKELAARSLHALSQRRGKPFVAVNCSALPAELLESELFGYVRGAFTGATRDKEGLFASANG
GTLLLDEIGDAPPAVQVKLLRVLQERRITRVGSLNEEEVDVRVVAATNRDLLTEVRDGRFREDLFYRLHVVPIVMPPLRE
RVEDLPLLCEVFLSRAAARHGLSEPKLTPEALRVLLAHPWPGNVRELANVMEGAVLLCRGERLQPQDLSTLLVPPARKLD
GWSSGAEPEDAEAPAISDAAGEILSVAFGDPGSALPSLKEARDTFERAYLVEVLRRANGNVSAAAKLSGRNRTDFYDLLR
KHGLSSASFKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-58 41
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-58 41
norR ABD94719.1 putative nitric oxide reductase transcriptional regulator Not tested ExoU island B Protein 2e-45 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_31300 YP_008152646.1 Fis family transcriptional regulator BAC0467 Protein 2e-65 45
SCE1572_31300 YP_008152646.1 Fis family transcriptional regulator BAC0089 Protein 2e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_31300 YP_008152646.1 Fis family transcriptional regulator VFG1214 Protein 1e-67 46
SCE1572_31300 YP_008152646.1 Fis family transcriptional regulator VFG0116 Protein 1e-56 44
SCE1572_31300 YP_008152646.1 Fis family transcriptional regulator VFG1249 Protein 3e-60 43