Gene Information

Name : SCE1572_30310 (SCE1572_30310)
Accession : YP_008152450.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8613007 - 8613498 bp
Length : 492 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAAGAGGGATCGGTCGCGCCGAAGGAGCGCGTGAACATCACGTACAAGCCGGCCACGGGGAACGCGAAGGAGGACGT
CGAGCTGCCGCTGAAGATGCTGATGCTCGGCGACTACACGCAGCGGCCGGATCCGCGGCCCCTCGAGGACCGCAAGCCGA
TCAACGTGGACAAGGACAACTTCCAGAAGGTCATGAGCGAGCAGAAGCTCGCGCTCACCTTCAACGTCAAGGACGTCCTG
TCCGAGCAGGAGAACAGCGAGCTCACGGTCAACCTCAAGTTCCGCCGGCTGAGCGACATGGAGCCCGAGGCCATCGCGAC
CCAGGTGCCGGAGCTCAAGAAGCTCCTCGACCTGCGCGCCGCGCTGACGGCCCTCAAGGGCCCGCTCGGGAACGAGAAGG
CGTTCCGCAACAAGATTCAGCAGATCCTGAGCGACCCGGCTCAGCGCAACAAGATCGTGAGCGAGCTCGGGCTCGACAAG
GAAGGGGAGTGA

Protein sequence : 
MKEGSVAPKERVNITYKPATGNAKEDVELPLKMLMLGDYTQRPDPRPLEDRKPINVDKDNFQKVMSEQKLALTFNVKDVL
SEQENSELTVNLKFRRLSDMEPEAIATQVPELKKLLDLRAALTALKGPLGNEKAFRNKIQQILSDPAQRNKIVSELGLDK
EGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-31 47
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-31 43
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 9e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_30310 YP_008152450.1 hypothetical protein VFG2092 Protein 7e-43 55
SCE1572_30310 YP_008152450.1 hypothetical protein VFG2474 Protein 3e-39 51