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Name : SCE1572_30305 (SCE1572_30305) Accession : YP_008152449.1 Strain : Sorangium cellulosum So0157-2 Genome accession: NC_021658 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 8611519 - 8613003 bp Length : 1485 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGCGACGGAGACACAGGCCGCGGGGAGCGCAGGCGTCCAGACCCTGGAGGGAGGGTCGCTGCTCGACGAGATCCTCGC CGAGACGAAGATGACGCCCGGCGACGAGGGGTACGAGATCGCCAAGCGGGGCGTGCAGGCCTTCATCTCGGAGCTCGTCG CCCCGCGGCGCGAGGGTGAGAAGGTCGACAAGGCCTTCGTCGACGCGCTGATCGCGGAGATCGACGTCAAGCTCTCGCGG CAGATCGACGAGATCCTCCACCACCCCAGCTTCCAGAAGCTCGAGTCCGCCTGGCGCGGCCTCAAGTTCGTCATCGACCG CTGCGACTTTCGCGAGAACGTCAAGGTCGAGATGCTCAACTGCTCCAAGGAGGACCTCCTCGCCGATTTCGAGGACGCCC CCGAGGTGCCGAAGAGCGGCCTGTACAAGCTCGTCTACTCGGCGGAGTTCGGCCAGTTCGGCGGCAAGCCGGTCGGCGCG ATCATCGCGAACTACGAGTTCGGCCCCGGCCCCCAGGACATCGCGCTGCTCCAGAAGTGCGCCGCCGTCGCGGCGATGTC GCACGCGCCGTTCATCGCGGCGGCGGGCCCGCAGTTCTTCGGCCTCAAGGACTTCATCGGGCTGCCCAACCTGAAGGACC TGAAGGCGCTCTTCGAGGGGCCGCAGTACACGAAGTGGAACGCGTTCCGCGAGACCGAGGACTCGCGCTACGTCGGCCTC GTGATGCCGCGCTTCCTGCTCCGCCTGCCCTTCGGCGCCAACACCGTCCCGGTGAAGGCGTTCAACTACGAAGAGGACGT GGTCGGCAAGCACGACGCGTACTGCTGGGGCAACGCGACGTACGCCTTCGCCACGCGGCTCGCCGACAGCTTCGCCAAGT ACCGCTGGTGTCCCAACATCATCGGCCCGCAGGCGGGCGGCGCGGTGGAGAACCTGCCGCTCCACCAGTACGAGGCGATG GGCGAGATCCAGACCAAGATCCCGACCGAGATCATGCTCACCGAGCGGCGCGAGTTCGAGCTGTCCGAGGAGGGCTTCAT CGGGCTCACGTTCCGCAAGGACTCGGACAACGCCTGCTTCTTCTCGGCGAACTCGGCGCAGAAGCCCAAGTTCTACGGGC AGAGCGAGGAGGGCAGGGCGGCCGAGATGAACTACCGGCTCGGGACGCAGCTGCCGTACATGTTCATCATGTGCCGCATC GCGCACTACCTGAAGGTGCTGCAGCGCGAGCAGATCGGGACGTGGAAGGAGCGCGCCGACCTCGAGAGGGAGCTGAACGA GTGGATCGGCCAGTACGTCGCCGATCAGGACGTCGTCTCCGCGGCGACCCGCGGGCGCCGGCCGCTCCGCAAGGCGAGGA TCATCGTGACCGAGGTGCCGGGCAACGCCGGCTGGTACAAGGTCGACATGCAGGTGCGCCCGCACTTCAAGTACATGGGC GCGTTCTTCACGCTGAGCCTCGTCGGCAAGCTCGACAAGGAGTGA Protein sequence : MATETQAAGSAGVQTLEGGSLLDEILAETKMTPGDEGYEIAKRGVQAFISELVAPRREGEKVDKAFVDALIAEIDVKLSR QIDEILHHPSFQKLESAWRGLKFVIDRCDFRENVKVEMLNCSKEDLLADFEDAPEVPKSGLYKLVYSAEFGQFGGKPVGA IIANYEFGPGPQDIALLQKCAAVAAMSHAPFIAAAGPQFFGLKDFIGLPNLKDLKALFEGPQYTKWNAFRETEDSRYVGL VMPRFLLRLPFGANTVPVKAFNYEEDVVGKHDAYCWGNATYAFATRLADSFAKYRWCPNIIGPQAGGAVENLPLHQYEAM GEIQTKIPTEIMLTERREFELSEEGFIGLTFRKDSDNACFFSANSAQKPKFYGQSEEGRAAEMNYRLGTQLPYMFIMCRI AHYLKVLQREQIGTWKERADLERELNEWIGQYVADQDVVSAATRGRRPLRKARIIVTEVPGNAGWYKVDMQVRPHFKYMG AFFTLSLVGKLDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 1e-151 | 56 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 9e-152 | 56 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 9e-146 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCE1572_30305 | YP_008152449.1 | type VI secretion protein | VFG2093 | Protein | 3e-165 | 64 |
| SCE1572_30305 | YP_008152449.1 | type VI secretion protein | VFG2475 | Protein | 2e-171 | 63 |
| SCE1572_30305 | YP_008152449.1 | type VI secretion protein | VFG2070 | Protein | 1e-85 | 41 |
