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Name : SCE1572_29155 (SCE1572_29155) Accession : YP_008152220.1 Strain : Sorangium cellulosum So0157-2 Genome accession: NC_021658 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 8288361 - 8291501 bp Length : 3141 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : GTGAGCCCCGCCGCCGGCGTCCCCGCCGTGACCGAGTCGGACGTCGAGGAGCTCGCCCTCCAGACGTTCGCTCGGCTCGG CTACGAGTGCCTCCACGGCCCGGACATCGCCCCCGGCGAGCCCGCCGCGGAGCGCGCCACCTACGCCGACGTCGTCCTCC GCGGCCGCCTCGACGAGGCGCTCCGCCGCCTCAACCCCGGCGTCCCGCAGACCGCCATCCACGAGGCGCTCCGCAAGATC CTCGTCCCGGACGCCCCCTCGCTCCTCCAGAACAACCGCCGCTTCCACCGCCTGCTCCGCGACGGCGTCGAGGTCGAGAT CGCGACGCCCGGCGGCGAGGTCCGCGGCGAGCGCCTCCGCCTCTTCGACTTCGACGACATCGAGGAGAACGAATACCTCG TCGTCAACCAGCTCACCGTCATCGAGGGACCGCACAGGCACCGCCGCCCCGACATCGTCGTCTTCGTCAACGGCGTCCCC CTCGCCGTCGTCGAGCTCAAGAGCCCCGCCGACGAGAACGCGACGGTCCAGGGCGCGTTCAACCAGCTCCAGACCTACAA GGCGGAGATCCCGTCGCTCTTCGTCTACAACGAGCTGCTCGTCGTCTCGGATGGCACGACGGCGCGCCTCGGGACCCTCA CCTCCTCCTGGGAGCGCTTCGGCCCCTGGCGCACGGTCGACGGCAGCGCCGTGGCCGCGCGGGGCACCCTGGAGATGATC ACGCTCCTCGAGGGCGTCTTCGACCGCGCGCGCCTCCTCGACCTCGTCCGCCACTTCGTCGTGTTCGAGGAAGACCGCGA CGAGGTCGTGAAGAAGATCGCCGGCTACCACCAGTTCCACGCCGTGCGCACGGCCGTCGAGGAGACGGTCCGCGCGACCC GCCCCGGCGGCGACCGCAAGGTCGGCGTCGTCTGGCACACGCAGGGCTCGGGCAAGTCGCTGACCATGACCTTCTACGCG GGGAAGGTCGTGCTCGATCCGGCCATGGAAAACCCCACGATCGTGGTCATCACGGACCGCAACGACCTCGACGACCAGCT CTTCGGGACCTTCGGGCGCTGCCACGAGCTGCTCCGGCAGAAGCCGGTCCAGGCGCGCGACCGGAGCCACCTGCGCGAGC TGCTCCAGGTCGCGGCCGGCGGCGTCGTCTTCACCACGGTGCAGAAGTTCCTGCCCGAGGAGAAGGGCGACAGATTCCCC CGGCTCTCCGAGCGGCGGAACGTGGTCGTCATCGCCGACGAGGCGCACCGCAGCCAGTACGGCTTCAAGAGCAAGCTCGT CAAGACGAAGGACGGCGGCTATCTCGTGCCCGGCTTCGCGCAGCACATGCGCGACGCCCTGCCGAGCGCGTCGTTCATCG GCTTCACCGGCACCCCCATCGAAGCGGTCGACAAGGACACGCGCGCCGTCTTCGGCGACTACATCTCGGTCTACGACATC CAGCGCGCCGTGGAGGACGGGGCGACCGTCCCCATCTACTACGAGAGCCGCGTCGCGAAGCTCGACCTGAACGACGACCT CAAGAAGGTCATCGACGACGAGTTCGAGGAGGTCACCGAACAAGAAGAGGAGTCGAGGAAGGAAAAGCTCAAGTCGAAGT GGGCCGCGCTGGAGGCCGTCGTCGGCGCGGAGAAGCGCGTGAACATGATCGCCGAGGACTTGATCCGGCACTTCGAGGCT CGGGTCGAGGCGATGGAGGGCAAGGCGATGGTCGTCTGCATGTCGCGCCGCATCTGCGTGGACATGTACGCCGCGCTCGT CGCGCTCCGGCCCGCCTGGCACAGCCCGGACGACGACAAGGGCGCGATCAAGGTGGTGATGACCGGCTCCGCGTCCGATC CGCAGCCGTGGCAGCAGCACATCCGGAACAAGGCGCGCCTCCGCGACCTCGCCGACCGGCTGAAGGACCCGGCCGACCCG CTCAAGGTGGTCATCGTGCGCGACATGTGGCTCACCGGGTTCGACGCGCCCTGCCTGCACACGCTCTACGTCGACAAACC CATGCAGGGACACGGCCTCATGCAGGCCATCGCGCGCGTGAACCGCGTGTTCCGCGACAAGCCGGGCGGGCTGGTCGTCG ACTACCTCGGCCTCGCCGAGAACCTGCGCAAGGCGCTGGCGACGTACACCGAGAGCGGCGGCAAGGGCGACCCCGCACGC GATCATGCCAGGGCCGTGCCGCGCATGATGGAGATGATCGAGGTCTGTCGCGGCCTGTTCCACGGGTTCGACGTCATGGC GTTCGTGAACGGCTCGCCGATCGAGCGGCTCATGCTCCTGCCGGCCGCCCAGGAGCACATCTTCGGGCTCGAGGACGGGC GCGACCGGCTCGTGCAGGCCGTGACCGAGCTGAGCAGGAGCTTCGCGCTCGCGGTGCCGCACGACGACGCGCTGGCCGTC CGCGACGAGGTCGCGTTCTATCAGGCCGTGAAGGCCGCCGTCGTGAAGACGTCGCTGTCGGCGTCGGGCAAGTCGGAGGC TGAGGTCGAGCTGGCGATCCGTCAGATCGTGTCGAAGGCGATCTCGACCGACGGCGTGATGGACGTGTTCGCGGCCGCCG GGCTGAAGCGGCCGGACCTCTCCATCCTGTCGGAGGAGTTCCTCGCCGACGTGAAGGCGATGCAGCACAAGAACGTCGCC GTGGAGCTGCTGCGGAAGCTCCTGCACGACGAGCTGAAGGTCCGGAGGCGCACGAACCTCGTCCAGTCGGAGGCGTTCTC CGACAAGCTGGAGAAGACCATCGCGCGGTACCGCAACCGCGGTGTCGAGACGGCGCAGGTCATCGAGGAGCTGATCCGGA TGGCCAGGGATGTGAAGGTCGCGCAGAAGCGCGGCGAGGATCTGAAGCTCAACGACGCGGAGCTGGCCTTCTACGACGCC CTCGGGGCGAACGACTCTGCCGTGCAGGTGCTCGGCGACGCGGTGCTCGCGCAGATCGCCCGCGAGCTGACCGAGACCAT CCGCAACTCGGTGACCATCGACTGGGCCGTGAAGGAGACAGTGCGGGCGAAGCTCCGCACCCTCGTGCGCCGCAGGCTGA AGAAGCACGGGTATCCGCCGGACAAGACGGATGATGCGGTCAAGAAGGTGCTGGATCAGGCCGAGCTGCTCGCGCTGGAG TGGGCGGCGCAGACACCCTGA Protein sequence : MSPAAGVPAVTESDVEELALQTFARLGYECLHGPDIAPGEPAAERATYADVVLRGRLDEALRRLNPGVPQTAIHEALRKI LVPDAPSLLQNNRRFHRLLRDGVEVEIATPGGEVRGERLRLFDFDDIEENEYLVVNQLTVIEGPHRHRRPDIVVFVNGVP LAVVELKSPADENATVQGAFNQLQTYKAEIPSLFVYNELLVVSDGTTARLGTLTSSWERFGPWRTVDGSAVAARGTLEMI TLLEGVFDRARLLDLVRHFVVFEEDRDEVVKKIAGYHQFHAVRTAVEETVRATRPGGDRKVGVVWHTQGSGKSLTMTFYA GKVVLDPAMENPTIVVITDRNDLDDQLFGTFGRCHELLRQKPVQARDRSHLRELLQVAAGGVVFTTVQKFLPEEKGDRFP RLSERRNVVVIADEAHRSQYGFKSKLVKTKDGGYLVPGFAQHMRDALPSASFIGFTGTPIEAVDKDTRAVFGDYISVYDI QRAVEDGATVPIYYESRVAKLDLNDDLKKVIDDEFEEVTEQEEESRKEKLKSKWAALEAVVGAEKRVNMIAEDLIRHFEA RVEAMEGKAMVVCMSRRICVDMYAALVALRPAWHSPDDDKGAIKVVMTGSASDPQPWQQHIRNKARLRDLADRLKDPADP LKVVIVRDMWLTGFDAPCLHTLYVDKPMQGHGLMQAIARVNRVFRDKPGGLVVDYLGLAENLRKALATYTESGGKGDPAR DHARAVPRMMEMIEVCRGLFHGFDVMAFVNGSPIERLMLLPAAQEHIFGLEDGRDRLVQAVTELSRSFALAVPHDDALAV RDEVAFYQAVKAAVVKTSLSASGKSEAEVELAIRQIVSKAISTDGVMDVFAAAGLKRPDLSILSEEFLADVKAMQHKNVA VELLRKLLHDELKVRRRTNLVQSEAFSDKLEKTIARYRNRGVETAQVIEELIRMARDVKVAQKRGEDLKLNDAELAFYDA LGANDSAVQVLGDAVLAQIARELTETIRNSVTIDWAVKETVRAKLRTLVRRRLKKHGYPPDKTDDAVKKVLDQAELLALE WAAQTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 51 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
