Gene Information

Name : SCE1572_28900 (SCE1572_28900)
Accession : YP_008152170.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8234995 - 8236392 bp
Length : 1398 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAGACGGAAGGCGGCTCGCCCTTGAACTTGAACCCTGAACCCCACGCCGCCAGCGATCGCAGGCGCCTGCGCGGCGG
CGCGCCGATCCAGATCGGCCTCCTCGGCTGCGGGACGGTCGGCGGCGGCGTCCTCCGCCTCCTCGCCGAGAACTCCGGCT
ACCTGGCGGAGCGCGCTGGCGTGCCCCTCGTGGTGAAGCGCGTGGTCGTGCGCGACCTCGAGAAGGAGCGCGTCTCGGCC
CTGGATCGCGGCTTGCTCTCCACGAACCCCGCGGAGGTGGTCGACGACCCCTCGATCGACCTCGTCGTCGAGGTGATGGG
CGGCGAGACGCCCGCGCGCGAGCTCATCGAGCGCGCCATCGATCGCGGCAAGGGCGTGGTCACCGCGAACAAGCTCCTGC
TCGCCGCCCACGGCCCCGCGCTCCTCGCGCGGGCCGCGGCGCGCCAGGTCGACCTCGCGTTCGAGGGCGCGGTCGGCGGC
GGCATCCCGATCATCCGCACGCTCCGGGACGCCTTCGCGAGCGACTGGGTCGAGCGCGTCACCGCGATCGTGAACGGCAC
CTGCAACTACATCCTCACGCGCATGCGCGACACCGGCGCGTCGTTCGACGCCGCGCTGCGCGAGGCGCAGGACCTCGGCT
ACGCCGAGAAGCCCGATCCGTCGCTCGACGTCGACGGCCACGACGCCGCGCACAAGCTGATCGTGCTGGCGATGCTCGCC
TTCGGGGCGCAGGTCGACGCCGCCCAGGTGCACACGTCCGGGATCCGCACCATCGAGGAGGCCGACCACCTCTACGCCGA
CCGGTTCGGCTACACGATCAAGCACCTCGCGATCGGCCGCGACCTCGGCGACGCCATCGAGCTGCGCGTGCACCCGACGC
TGATCCCGAAGCAGAGCGTGCTCGCCAACGTCTCCGGCGTGCTCAACGCCGTGCTGCTCGAGGGGCGCGCCGTCGGCCCG
TCGCTCGTCTACGGCCGCGGCGCCGGCGATCTGCCGACCGCGGTCAGCGTCGTCTCCGACGTCCTCGACGTCGCGCGCTC
GATCGCCTCGGGCGTCGCCGGCATGCAGGGCCGCGGCATGTCGATCAAGCCCCGCCGGGTCCGCCCGCTCAGCGAGATCG
TCTCGCGGTACTACCTGCGCTTCGCGGTCGAGGACCGCCCGGGCGTCATGGGGCGGATCGCCGGCGCGCTCGGCGACGCC
GGCGTCAGCATCGAGCAGATCGTGCAGCAGGGGCCGACCAAGCGGAGCTCGGGCGCGGCGGCGCGCGAGCCCGCGGTCGA
CGTCGTGCTCATCACGCACGACGCGCAGGAGGGGCTCGTGCGGAGCGCGCTCGACGCCGTCGCGCGCGAGGAGTTCCTCC
GCGAGCCGGTGCACCTCTTCCGCATCGAGGAGCCGTGA

Protein sequence :
MKTEGGSPLNLNPEPHAASDRRRLRGGAPIQIGLLGCGTVGGGVLRLLAENSGYLAERAGVPLVVKRVVVRDLEKERVSA
LDRGLLSTNPAEVVDDPSIDLVVEVMGGETPARELIERAIDRGKGVVTANKLLLAAHGPALLARAAARQVDLAFEGAVGG
GIPIIRTLRDAFASDWVERVTAIVNGTCNYILTRMRDTGASFDAALREAQDLGYAEKPDPSLDVDGHDAAHKLIVLAMLA
FGAQVDAAQVHTSGIRTIEEADHLYADRFGYTIKHLAIGRDLGDAIELRVHPTLIPKQSVLANVSGVLNAVLLEGRAVGP
SLVYGRGAGDLPTAVSVVSDVLDVARSIASGVAGMQGRGMSIKPRRVRPLSEIVSRYYLRFAVEDRPGVMGRIAGALGDA
GVSIEQIVQQGPTKRSSGAAAREPAVDVVLITHDAQEGLVRSALDAVAREEFLREPVHLFRIEEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 3e-55 49
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 3e-55 49