Gene Information

Name : SCE1572_28750 (SCE1572_28750)
Accession : YP_008152140.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8195381 - 8196112 bp
Length : 732 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGATGTCCCGGTCTTCGTGAGCGACCTCTCGAAGGTGTACCACGCCGATCGCGCGGACCTCGCGGTGCGGGCGGTCGA
CCGGATCGGGTTCGAGGTGCGGCGCGGCGAGTCGGTCGCGATCATCGGGCCGTCCGGGTGCGGGAAGTCGAGCCTGCTGA
ACATCCTCGGGTGCCTGGATCGGCCGACCGAGGGCACGTACCGGCTCGGGGGGCGCGACGTGGCGGAGCTCGACGACGAC
GAGCTCGCGTCGCTCAGGAACAAGCACATCGGGTTCGTGTTCCAGAGCTTCAACCTGCTGCCGCGGATGACGGCGGCGGA
GAACGTCGAGCTGCCGCTGCTCTACGGGGCGGTGAAGAACAGCCGGGCGCTCGCGGAGAACGCGCTGGCGCGGGTCGGGC
TCGCGGCGCGCGCGCGGCACCTGCCGTCCGAGCTCTCGGGCGGGCAGCGGCAGCGCGTCGCGATCGCGCGGGCGATCGTG
ACGCGGCCGTCGATCCTCTTGTGCGACGAGCCGACGGGCGCGCTCGACAGCCGGACGGGGCGCGACGTGCTGGAGCTCTT
GATGTCGCTGAACGCGGACGGGACGACGCTGGTGATGGTGACGCACGACCTCGGCGTGGCGCGGGCGCTCGCGCGCGCCA
TCCACATGAAGGACGGTCGCATCGTGGCCGACGGCCCGTCGAGCACCGTGGTGGCGGCGTTCCACGCGAGCGAGATGGAG
ACGGCATGCTGA

Protein sequence : 
MDVPVFVSDLSKVYHADRADLAVRAVDRIGFEVRRGESVAIIGPSGCGKSSLLNILGCLDRPTEGTYRLGGRDVAELDDD
ELASLRNKHIGFVFQSFNLLPRMTAAENVELPLLYGAVKNSRALAENALARVGLAARARHLPSELSGGQRQRVAIARAIV
TRPSILLCDEPTGALDSRTGRDVLELLMSLNADGTTLVMVTHDLGVARALARAIHMKDGRIVADGPSSTVVAAFHASEME
TAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_28750 YP_008152140.1 ABC transporter NC_012469.1.7686878. Protein 4e-45 55
SCE1572_28750 YP_008152140.1 ABC transporter NC_008702.1.4606598. Protein 2e-37 55
SCE1572_28750 YP_008152140.1 ABC transporter CP001581.1.gene798.p Protein 4e-33 45
SCE1572_28750 YP_008152140.1 ABC transporter NC_012469.1.7685735. Protein 8e-33 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_28750 YP_008152140.1 ABC transporter VFG2059 Protein 9e-13 41