Gene Information

Name : SCE1572_25840 (SCE1572_25840)
Accession : YP_008151564.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : acetoacetate metabolism regulatory protein AtoC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7420985 - 7422466 bp
Length : 1482 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGCGTCGATCCCGCCGAGCATCCTGCCGAACGCCACCCGGGTGCTGGTCGTCGATGACGAGCCGAGCCTCCGTCAGGT
GCTCACCGTCGCCTTCCGCCGCCAGGGCTACGAGGTCGCGCTCGCGCCCGGCGCGCGCGCCGCGCTCGAGGCGATCCTCC
AGAACCCGCAGCCGTTCCCGCTGATCCTCACCGACCTGGTGATGCCGGACGGCTCGGGGATCGAGGTGCTCACGGCCGCG
AAGGCGCGGAGCAGCGCGACCGAGGTGATCGTGATGACCGCGCACTCCACCGTGGAGAGCGCGCTCGACGCGATGCGACA
CGGGGCGTACGACTTCGTGACCAAGCCGTTCTCGCCCGCGGAGCTCACCGCGCTCGCCGCGAAGGCGCTCGAGAAGAGCT
CGATCGTCGCCGAGAACCAGCGGCTGCGCGCGCAGCTCGAGCGGCTCGACCTGCCGTCGCGCGAGCCGCTCGGCACGAGC
CCCGCGATGCAGCGGATCTCCGAGCTCATCGGCAAGATCGCGCCGACGCGCACGACCGTGCTGCTCACGGGCGAGAGCGG
GACCGGCAAGGAGCGCGTGGCCCGCGCGATCCACGAGCAGAGCGACCGCGCCGCGAAGCCGTTCCTGGTCGTCAACTGCG
GGGCGCTGCCGGAGGCGCTCATGGAGAGCGAGCTGTTCGGCCACGAGAAGGGCTCGTTCACGGGCGCCGGCGCCCGCGCG
CTCGGGCTGTTCCGGGAGGCGGACGGCGGGACGCTGCTCCTCGACGAGGTCGGGGAGCTGCCGGCCTCGCTGCAAGTGAA
GCTCCTCCGCGTGCTCCAGGAGCGGAAGGTGCGCCCGGTCGGCGCCGCCGCGGAGATCGCGGTGGACGTCCGGGTCCTCG
CCGCGACAAACCGGGATGTGGAGGTCGAGGTGCGCGAGGGGCGGTTCCGGCAGGACCTCTACTACCGGCTCAACGTCATC
CGCATCGAGCTGCCGCCCCTGCGCGAGCGCCCCGGGGACGTCTCGCGGCTCGCCGAGCGCTTCCTGCGCCGCTTCGCCGC
CGAGCTCGGCAAAGACGTCCGCGGCCTCACGACGGACGCGATGCGCGCGCTCGACGCCTACGGCTTCCCGGGCAACGTGC
GCGAGCTCGAGAACATGATGGAGCGCGCGGTGGCGCTCGCCGGAGGGCCCTCGATCGGGCTCGGCGACCTCCCGAGCGCC
GTCGCCGGCCTCAGCGCGAGCCCGGCCCCGCTGCTCGCGCAGCTGCCGCCCGGCGGGTGCATGCTCGACGAGGTGCTCGG
GGAGGTCGAGCGCCGGCTCATCCTCCAGGCGCTCGAGCGCACCGGCGGCGTCCGCAAGGCCGCCGCGAAGCTGCTCGGCG
TGTCGTTCCGGTCGCTGCGCTACCGGCTCGCCAAGCACGCGCTCGCCGCCGATGGGGACAGCGACGACGACCTGGAAGGG
GGATCCCGACGAGAATCGTCACCGCCCGGCGCCCCGCAGTGA

Protein sequence : 
MASIPPSILPNATRVLVVDDEPSLRQVLTVAFRRQGYEVALAPGARAALEAILQNPQPFPLILTDLVMPDGSGIEVLTAA
KARSSATEVIVMTAHSTVESALDAMRHGAYDFVTKPFSPAELTALAAKALEKSSIVAENQRLRAQLERLDLPSREPLGTS
PAMQRISELIGKIAPTRTTVLLTGESGTGKERVARAIHEQSDRAAKPFLVVNCGALPEALMESELFGHEKGSFTGAGARA
LGLFREADGGTLLLDEVGELPASLQVKLLRVLQERKVRPVGAAAEIAVDVRVLAATNRDVEVEVREGRFRQDLYYRLNVI
RIELPPLRERPGDVSRLAERFLRRFAAELGKDVRGLTTDAMRALDAYGFPGNVRELENMMERAVALAGGPSIGLGDLPSA
VAGLSASPAPLLAQLPPGGCMLDEVLGEVERRLILQALERTGGVRKAAAKLLGVSFRSLRYRLAKHALAADGDSDDDLEG
GSRRESSPPGAPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 4e-64 43
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 4e-64 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_25840 YP_008151564.1 acetoacetate metabolism regulatory protein AtoC BAC0089 Protein 6e-75 47
SCE1572_25840 YP_008151564.1 acetoacetate metabolism regulatory protein AtoC BAC0467 Protein 8e-71 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_25840 YP_008151564.1 acetoacetate metabolism regulatory protein AtoC VFG1214 Protein 4e-78 47
SCE1572_25840 YP_008151564.1 acetoacetate metabolism regulatory protein AtoC VFG0116 Protein 3e-56 45
SCE1572_25840 YP_008151564.1 acetoacetate metabolism regulatory protein AtoC VFG1249 Protein 7e-62 45