Gene Information

Name : SCE1572_25750 (SCE1572_25750)
Accession : YP_008151547.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7387770 - 7389167 bp
Length : 1398 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGTTGCGGACCGAATGGGTGAGCAAGCGCGCCGGGAGCCCCAACCAGAGCCAGATGCACTTCGCGCGGAAGGGCATCGT
CACGGAGGAGATGGAGTACGTCGCCCGCCGTGAGAACCTCGCGCCCGAGCTCATCCGCAGCGAGGTCGCGCGCGGCCGGA
TGATCATCCCCGCCAACAAGAACCACCTGAACCTCGAGCCGATGTGCATCGGCATCGCGTCGCTCTGCAAGGTGAACGCG
AACATCGGGAACAGCCAGACCACGAGCGACGTGAGCGGCGAGCTCGAGAAGCTGCGCTATGCCATCAAGTACGGCGCCGA
CACCGTGATGGACCTGTCGACCGGCGGCGACATCGACGGCATCCGCCGGGCGATCATCGCCGACTCCCCGGTGCCGATCG
GCACGGTGCCGATCTACCAGGCGCTCGAGGCTTGCAAGGGCACGGAGAAGATGACGGCCGCCGACCTCATCGACATGCTC
GAGCACCAGGCGAAGCAGGGGGTCGATTACTTCACGATCCACGCCGGCGTGCTGCTCGAGCACCTGCCGCTCGTGAAGGG
CCGCATCACCGGCATCGTCTCGCGCGGCGGCTCGATCATGGCGCAGTGGATGATCGAGCACCACAAGCAGAACCCGTTCT
ACACGCACTGGGACAAGGTGCTCGAGGTCTGCGCCAAGTACGACGTCACGATCTCGGCCGGCGACGGCCTCCGCCCCGGC
TGCCTCCACGACGCGAGCGACGCGGCGCAGTTCGCCGAGCTGAAGACGCTCGGCGAGCTCACGAAGCGCGCCTGGGAGAA
GGACGTGCAGGTCATGATCGAGGGCCCCGGGCACGTGCCGTTCGATCAGATCGCGATGAACGTGCAGAAGGAGATGGAGC
TCTGCCACGAGGCGCCGTTCTACGTGCTCGGCCCGCTCGTCACCGATTTCGCGCCCGGCTACGACCACATCACGAGCTGC
ATCGGCGCCACGATGGCCGGCTTCGCGGGCGCCGCGATGCTCTGCTACGTGACGCCGAAGGAGCACCTCGGCCTGCCGAA
CCCGGAGGACGTGAAGCAGGGCCTCATCGCCTACAAGATCGCCGCGCACGCGGCGGACGTGGCGCGCAAGCGCCCGGGCG
CGCGGGATCGCGACGACGCGCTGAGCCGCGCCCGCTACGCCTTCGACTGGAAGAAGCAGTTCGCGCTCTCGCTCGATCCG
GAGACGGCGCAGGCGATGCACGACGAGACGCTCCCGCAGGAGTACTTCAAGACCTCGGAGTTCTGCTCGATGTGCGGGCC
GAAGTTCTGCTCGATGCACATCAACCGCGTGGTCGACGAGTACAACGCGCGGCAGGATCGGCAGGAGACCGAGAACGCGC
CCACGAAGCGGTCGCTCTCGCTCATCGATCAGCCGTGA

Protein sequence :
MLRTEWVSKRAGSPNQSQMHFARKGIVTEEMEYVARRENLAPELIRSEVARGRMIIPANKNHLNLEPMCIGIASLCKVNA
NIGNSQTTSDVSGELEKLRYAIKYGADTVMDLSTGGDIDGIRRAIIADSPVPIGTVPIYQALEACKGTEKMTAADLIDML
EHQAKQGVDYFTIHAGVLLEHLPLVKGRITGIVSRGGSIMAQWMIEHHKQNPFYTHWDKVLEVCAKYDVTISAGDGLRPG
CLHDASDAAQFAELKTLGELTKRAWEKDVQVMIEGPGHVPFDQIAMNVQKEMELCHEAPFYVLGPLVTDFAPGYDHITSC
IGATMAGFAGAAMLCYVTPKEHLGLPNPEDVKQGLIAYKIAAHAADVARKRPGARDRDDALSRARYAFDWKKQFALSLDP
ETAQAMHDETLPQEYFKTSEFCSMCGPKFCSMHINRVVDEYNARQDRQETENAPTKRSLSLIDQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-111 59
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-111 59
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 4e-105 56