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Name : SCE1572_16595 (SCE1572_16595) Accession : YP_008149739.1 Strain : Sorangium cellulosum So0157-2 Genome accession: NC_021658 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4645017 - 4645982 bp Length : 966 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGTGGATGACTGTCAACCCGGTTTTCTCGCGATCGATCCGGAGATGCGGCGCCTTCGGGATGCCCTGGAGACCGTGGC CCCCACGCCGCTGCCGGTCCTGATCCTCGGCGAGACGGGGACCGGCAAAGAGGTCGTGGCGGAGTGGATCGCCGGCATGT CGCGGCACCCGCGCGAGCGGTTCGTGAAGGTGAACTGCGCGAGCCTGTCGGAGTCGCTCGTCGAGAGCGAGCTCTTCGGC CACGAGCGCGGCGCGTTCACCGGGGCGGTGGCCCCGCGCGAAGGCCTGTTCGAGGCCGCCCACGAGGGCACGCTCTTCCT CGACGAGGTCGGGGAGCTGTCCCCGCGCACGCAGGCGAAGCTCCTCCGCACGCTGGAGTACGGCGAGATCGTCCGCGTCG GCAGCACGCGGCCGCGGCGCGTGGACGTCCGGGTGATCGCGGCGACGCACCGCGACCTCGAGCAGATGGTGAGGGACGGG GACTTCCGCCAGGACCTCTATTTCCGCCTCAACGCGGTCACGCTGCGCATCCCCCCGCTCCGGGCCCGCACCACCGAGGT CCTCCCGCTCGCGGAGCTCTTCGCGGCGCGCCTCGCGCGGCGGCTCGGCCGCCCGGCGCCGCGGCTCGCGCCCGAGGCGA CGGCGGCGCTCCTCGCGCACACCTGGCCGGGCAACATCCGGGAGCTGCGCCACGTGATCGACCGCGCCGTGGTCATGTCC AAGGGGGGGCCGATCGTCGCGGACCACCTGATGCTCGAGGCGCCGCGCGAGAAGGCCGACGCCGGGATCAAGGGCGACCT GCGCACGTTCGAGCGGGACCGCATCGTCGCCGCGCTCGACCGCACCCGCCAGAACCAGACGCGCGCCGCCGAGCTGCTCG GCGTGTCGCGGCGCACGCTCACCAACAAGCTCAACGCCTACGGCATCGCGCGGCCCCGGAAGAAGGTCGCGCTGGAGGGC TGTTGA Protein sequence : MVDDCQPGFLAIDPEMRRLRDALETVAPTPLPVLILGETGTGKEVVAEWIAGMSRHPRERFVKVNCASLSESLVESELFG HERGAFTGAVAPREGLFEAAHEGTLFLDEVGELSPRTQAKLLRTLEYGEIVRVGSTRPRRVDVRVIAATHRDLEQMVRDG DFRQDLYFRLNAVTLRIPPLRARTTEVLPLAELFAARLARRLGRPAPRLAPEATAALLAHTWPGNIRELRHVIDRAVVMS KGGPIVADHLMLEAPREKADAGIKGDLRTFERDRIVAALDRTRQNQTRAAELLGVSRRTLTNKLNAYGIARPRKKVALEG C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpR | AAT96162.1 | HrpR | Virulence | T-PAI | Protein | 2e-37 | 44 |
| hrpR | AAT96216.1 | HrpR | Virulence | T-PAI | Protein | 2e-37 | 44 |
| hrpR | NP_791206.1 | type III transcriptional regulator HrpR | Virulence | Hrp PAI | Protein | 1e-35 | 43 |
| hrpR | AAC34752.1 | HrpR | Virulence | Hrp PAI | Protein | 7e-36 | 43 |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 4e-37 | 42 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 4e-37 | 42 |
| hrpS | ABQ88367.1 | HrpS | Virulence | Hrp PAI | Protein | 3e-35 | 42 |
| hrpS | AAA17650.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 3e-35 | 42 |
| hrpS | AAC35800.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 3e-36 | 42 |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 1e-34 | 42 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-32 | 42 |
| hrpR | AAC35799.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 1e-33 | 41 |
