Gene Information

Name : SCE1572_14675 (SCE1572_14675)
Accession : YP_008149370.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : chemotaxis protein CheY
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4092223 - 4092954 bp
Length : 732 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAACATGCTAGAGGACGTGCTCAGCATGACCCGGAACCCTCAAGCACCGGCCCGGACCGTCCTGCTCGTCGAGGACGA
TCCCAGCATCGCTATGGGTCTCGAGATGAACCTCACCGCCGAGGGCTACCGCGTCGAGGTGGCCGAGGACGGCGAGCGCG
GGCTCGCGCTCGCCCGCGCGGGCGGGATCGACCTCATCATCATCGACGTGATGCTCCCGCGCCTGAACGGCTTCGAGCTG
CTGCGCATCCTCCGGAACGAGCGGCGCACCCTGCCCGTGATCATGCTGTCCGCGCGCGGCGCCGAGATGGACAAGGTGAT
GGGGCTCGAGCTCGGCGCCGAGGACTACATCACGAAGCCGTTCAGCCTGGCCGAGCTGCTCGCCCGCGTGAAGGCGGTGC
TCCGGCGCGACGCGATCGCGCGCGCGGACGGGGCGCAGCTGCGCGCCGGCGACATCGTGATCAACGCGGCGACGCGCGAG
GTCCGCCGCGGCGAGGCGCTGATCGAGCTCACGGCGACCGAGTTCGACGTCCTGCTCTGCCTCGCCGAGGCCGGCGGCCG
CGTGCTGTCCAGGGAGCAGATCCAGGCCAAGGTGTGGGGCCCGACGCACCACGGCACCCCGCGCACCATCGACAACTTCA
TCCTCCAGCTCCGCAACAAGCTGGAGGACAACGCGACCGCGCCGCGCCACATCCTGACCGTGCGCGGCGTCGGCTACCGC
TTCGTCCCCTGA

Protein sequence :
MNMLEDVLSMTRNPQAPARTVLLVEDDPSIAMGLEMNLTAEGYRVEVAEDGERGLALARAGGIDLIIIDVMLPRLNGFEL
LRILRNERRTLPVIMLSARGAEMDKVMGLELGAEDYITKPFSLAELLARVKAVLRRDAIARADGAQLRAGDIVINAATRE
VRRGEALIELTATEFDVLLCLAEAGGRVLSREQIQAKVWGPTHHGTPRTIDNFILQLRNKLEDNATAPRHILTVRGVGYR
FVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-33 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-25 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_002952.2859905.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_002951.3237708.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_007622.3794472.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_002758.1121668.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_009641.5332272.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_013450.8614421.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_007793.3914279.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_003923.1003749.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_002745.1124361.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_009782.5559369.p0 Protein 2e-36 44
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY AE015929.1.gene1106. Protein 4e-27 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_010079.5776364.p0 Protein 6e-29 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_002952.2859858.p0 Protein 6e-29 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_007622.3794948.p0 Protein 6e-29 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_003923.1003417.p0 Protein 6e-29 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_013450.8614146.p0 Protein 6e-29 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_002951.3238224.p0 Protein 6e-29 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_007793.3914065.p0 Protein 6e-29 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_002758.1121390.p0 Protein 6e-29 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY HE999704.1.gene1528. Protein 3e-25 42
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY BAC0197 Protein 7e-28 42
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_012469.1.7686381. Protein 3e-32 41
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY AE016830.1.gene1681. Protein 3e-33 41
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY BAC0533 Protein 4e-25 41
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY CP000034.1.gene3834. Protein 1e-25 41
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY CP000647.1.gene4257. Protein 4e-25 41
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_012469.1.7685629. Protein 8e-32 41
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY NC_002695.1.915041.p Protein 1e-25 41
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY BAC0125 Protein 9e-27 41
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY CP001918.1.gene5135. Protein 5e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY VFG1702 Protein 5e-34 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY VFG1389 Protein 9e-25 43
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY VFG0596 Protein 2e-25 42
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY VFG1563 Protein 9e-33 42
SCE1572_14675 YP_008149370.1 chemotaxis protein CheY VFG1390 Protein 2e-32 41