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Name : sgaE (SCE1572_12000) Accession : YP_008148843.1 Strain : Sorangium cellulosum So0157-2 Genome accession: NC_021658 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : - COG ID : - EC number : 5.1.3.4 Position : 3315650 - 3316348 bp Length : 699 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : GTGAGCGCGACCTACCGAGAGCTGCGAGAGCGGGCCTGGGCGGCGAACCTGGAGATCCCGCGCCGAGGGCTCGCGATTTA CACGTTCGGCAACGTCTCGGCGTTCGACCGCGACCGGGGCGTCCTGGCCATCAAGCCGAGCGGCGTGCCGTACGACCGGC TGTCGATCGACGACATGGTGGTGGTCGATCTCGAGGGACAGGTGGTCGAGGGCCGACTCCGACCTTCCTCGGATACCCGG ACGCACATCGTCCTCTACGCGAACTTCCGGGGGGTGGGCGGCATCGTCCACACCCACTCGACCTACGCGACCGGCTGGGC GCAGACGGGCATGCCGATCCCGATCTACGGGACGACCCACGCCGATCACCTGGCCGAGGACGTGCCGTGCACCGCGGTGA TGCGGCCGGACGCCGTGCAGGGCGATTACGAGACCGAGACCGGCAGGCAGATCCTCGAGTGCTTCGCGGAACGGAACCCG CTCCACACGCCGATGGTGCTGGTGGCAGGACACGCCCCCTTCGCGTGGGGAGAGGACGCCGACAAGGCGGTATACAACGC GGCGGTGCTCGAGGAGATCGCGCGGATGGCGTTCATCACCCGCGCCATCCACCCGGGCGCCGCGCGCCTCCCGGACGCGC TCGTGCGCAAGCACTTCGAGCGGAAGCACGGCAAGGGCGCGTATTACGGCCAGAAGTAA Protein sequence : MSATYRELRERAWAANLEIPRRGLAIYTFGNVSAFDRDRGVLAIKPSGVPYDRLSIDDMVVVDLEGQVVEGRLRPSSDTR THIVLYANFRGVGGIVHTHSTYATGWAQTGMPIPIYGTTHADHLAEDVPCTAVMRPDAVQGDYETETGRQILECFAERNP LHTPMVLVAGHAPFAWGEDADKAVYNAAVLEEIARMAFITRAIHPGAARLPDALVRKHFERKHGKGAYYGQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 2e-50 | 52 |
