Gene Information

Name : SCE1572_10635 (SCE1572_10635)
Accession : YP_008148573.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2947080 - 2948570 bp
Length : 1491 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
GTGGCGGCGCGCGGCGGCGCTCTGCCGGCGCGCGCCCACGGGTTCTTGTCGCTGCCGACGCGCGCCGTCATGCGTCGGCC
GCGGCGGTTCCGCGCTACGGTGGAAAGCATGCCGCGCGGACATGTGCTGGTGCTCGATGACGAGCGAGCGATCTTGACGA
CACTGCAGAAGGCCCTGTCGCTCGAGGGCTACACGGTCGACGTCGCCGGCGGCGTCGGCGTGGCCGAGGAGAAGCTGGCG
AAGCGGAGCTATGACATCGCGCTCTTCGACGTCTCGCTGCCGGACGGCGACGGCGTCGAGCTGCTCCAGCGGATCCGCGC
CGGGGGGTCGGAGATCCCGGTCGTGATGATGAGCGGCCACGCGACGGTCGACGCCGCCGTCCGCGCGACGCGGCTCGGCG
CGATCGACTTCCTGGAGAAGCCGCTGTCGACCGATCGGCTGCTCTTGGTGCTCGAGAACACCCTGCGCCTGATCCGCGCC
GAGGCCGAGGCGAAGGCGCTCCGGACGCAGACCGGTCAGGTGGGCGAGCTCATCGGCGGGAGCCGGGCGATGCTGGAGCT
GCGCGAGCAGATCGCGCGCGCGGCGAGGGCGACCGCGACGGTGTTCGTGACGGGCGAGCGCGGCACCGGCAAGGAGCTCG
TCGCGCGCGCGATCCACGCGGCGTCGAAGCGGGCGCGCGGGCCTCTGGAGAAGATGAACTGCGCGGCGGTCCCGAGCGAG
CTCATCGAGAGCGAGATGTTCGGGCACGAGGCGGGGGCGTTCACGGGCGCGACGAAGCAGCGGCGGGGGAAGTTCGAGCG
CGCGAGCGGCGGGACGCTGTTCCTCGACGAGGTCGGGGACATGCCGCTCGCGATGCAGGCGAAGCTGCTCCGGGTGCTGC
AGGAGCGGGAGATCGAGCGCGTGGGCGGGCACGAGACGATCAAGGTCGACGTGCGCGTGGTGGCGGCGACGAACCGCGAC
ATCGAGGCCGCGTGCCGCGAGGGGCAGTTCCGGCCGGACCTGTACGATCGGCTGAACGTGCTGCCGCTGTCGCTGCCGCC
GCTCCGGGCGCGGCGCGAGGACGTGCCGCTCTTGGCGCGGCATTTCCTGGCGCTCGCGACGCAGGCGAACGATCGGCCCG
GGATGGCGTTCACGGAGGGCGGGATGCGGATGCTCGTCGCCTACAGCTTTCCGGGGAACGTGCGGGAGCTGCGCAACATC
ATCGAGCGGCTGGTGATCCTGACGCCGGACGAGACGATCGACGAGGGTGACGTGAAGGTCTGCTTCGGCGGGCAGCAGGC
GGCGATGAAGGGCGGGATCTTCCGGCCGGGGGTGCCGTTCCGGGTGCTCGCGGAGGAGGCGGAGCGGACTATCCTGGAGG
AGGCGCTCGGCCACTACGGAGGGCAGATGGCGGCGACGGCGCGGGGGCTCGGGCTGGAGCGGAGCCACCTGTACAAGAAG
TGCAAGGCGCTCGGGTTGCGCGGGGACAAGGGGGAGGCGGAGGACGAGTAG

Protein sequence : 
MAARGGALPARAHGFLSLPTRAVMRRPRRFRATVESMPRGHVLVLDDERAILTTLQKALSLEGYTVDVAGGVGVAEEKLA
KRSYDIALFDVSLPDGDGVELLQRIRAGGSEIPVVMMSGHATVDAAVRATRLGAIDFLEKPLSTDRLLLVLENTLRLIRA
EAEAKALRTQTGQVGELIGGSRAMLELREQIARAARATATVFVTGERGTGKELVARAIHAASKRARGPLEKMNCAAVPSE
LIESEMFGHEAGAFTGATKQRRGKFERASGGTLFLDEVGDMPLAMQAKLLRVLQEREIERVGGHETIKVDVRVVAATNRD
IEAACREGQFRPDLYDRLNVLPLSLPPLRARREDVPLLARHFLALATQANDRPGMAFTEGGMRMLVAYSFPGNVRELRNI
IERLVILTPDETIDEGDVKVCFGGQQAAMKGGIFRPGVPFRVLAEEAERTILEEALGHYGGQMAATARGLGLERSHLYKK
CKALGLRGDKGEAEDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-54 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-54 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_10635 YP_008148573.1 Fis family transcriptional regulator BAC0467 Protein 4e-68 44
SCE1572_10635 YP_008148573.1 Fis family transcriptional regulator BAC0089 Protein 4e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_10635 YP_008148573.1 Fis family transcriptional regulator VFG1214 Protein 5e-59 45
SCE1572_10635 YP_008148573.1 Fis family transcriptional regulator VFG0116 Protein 8e-59 41
SCE1572_10635 YP_008148573.1 Fis family transcriptional regulator VFG1249 Protein 9e-53 41