|
Name : SCE1572_09215 (SCE1572_09215) Accession : YP_008148292.1 Strain : Sorangium cellulosum So0157-2 Genome accession: NC_021658 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : - COG ID : - EC number : 3.6.3.12 Position : 2558846 - 2561035 bp Length : 2190 bp Strand : + Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction me DNA sequence : ATGACCTTGAACCTTCATTCCACCGCCGAGGTGATCGCCGAGCGCGGCGCGCCCGCTCCTCCTCCGCACCTCGAGCTGTC GCCGCCGCCGAGGTCGCGCCACCCGTCCCGCGACGTCGAGGGGAAGAAGACCGCGGCCAGGCCGCTCCTCGACCCCACGA TCCTCAAGCCGGCGATCGCCGCCGCGCTCCGCAAGCTCGACCCGCGCCACCAGATACGCAACCCGGTGATGTTCGTGGTC CTCGCCGGGAGCGCGCTCACCACGGCCCTGTTCGTGCACGCGCTCCTCGGCGAGGGCGAGGAGCCGGCCGGGTTCATCCT CGCCATCTCGCTCTGGCTCTGGTTCACCGTGCTCTTCGCGAACTTCGCGGAGGCCGTGGCCGAGGGGCGCGGCAAGGCGC AGGCCGACACGCTCCGCAAGGCGCGGCGCGACGTCGAGGCCGCGAAGCTCTCCGCCCCGGAGCGCGAAGCCGCGCGGACC ACGGTCCCCGCGTCGAACCTCCGGAAAGGAGACCTCGTGCTCGTGGAGGCAGGCGCGATCATCCCCGGCGACGGCGACAT CGTCGTCGGCGTCGCGTCGGTCGACGAGAGCGCCGTCACCGGCGAGAGCGCCCCCGTCGTGCGCGAGAGCGGCGGCGACA GGAGCGCCGTCACCGGCGGCACGCGCGTCCTGTCCGACTGGCTGATCATCCGCATCTCCGCCAACCCCGGTGAGGCGTTC CTCGACCGGATGATCTCGATGGTGGAGGGGGCGAAGCGCAAGAAGACGCCGAACGAGATCGCGCTCGACATCCTGCTCGC CGCGCTCACCATCGTCTTCCTCCTCGCGACCGTGACGCTGCTGCCGTACTCGATCTACGGCGTCCGGGCGGCAGGGCAGG GGACCCCGATCACCATCACCGTGCTCACGGCGCTGCTCGTGTGCCTGATCCCGACCACGATCGGCGGGCTGCTCTCGGCC ATCGGCATCGCCGGCATGGACCGGATGATCCAGGCGAACGTCATCGCCATGTCGGGCCGCGCCGTCGAGGCCGCCGGCGA CGTGGACGTGCTGCTGCTCGACAAGACCGGCACGATCACGCTCGGCAACCGGCAGGCGACGGAGCTCATCCCGGCGGACG GGGTCGCGGCGCAGGCGCTCGCCGACGCCGCGCAGCTCGCGTCGCTCGCCGACGAGACCCCCGAGGGGCGCAGCGTCGTC GTGCTCGCGAAGGAGAAGCACGGCCTGCGCGAGCGTGACCTCGGGGCCCTGGGCGCCCGCTTCGTCCCGTTCACCGCGCA GACCCGGATGAGCGGCGTCGACTGCGGCGCGCGCGAGATCCGGAAGGGCGCCGTCGAGGCGATCGAGGCCCACGTCAAGG AGAAGGGCGGCGCGGTCCCGGCCGCGGTGCGCGCGGTGACCGAGGCCATCGCCCGGAGAGGCGGCACGCCGCTCGTGGTC GCCGAGGGCGGCGCGGTGCTGGGCGTCATCCACCTCAAGGACATCCTGAAGGGCGGCATCCGGGAGCGCTTCGGCGACCT GCGGCGCATGGGGATCAAGACGGTGATGATCACCGGCGACAACCCGCTCACCGCCGCGGCCATCGCCGCCGAGGCCGGCG TCGACGACTTCCTCGCGCAGGCCACGCCCGAGGCCAAGCTGGCGCTGATCCGCGACTACCAGGCGGGCGGGCGGCTCGTC GCCATGACCGGCGACGGGACGAACGACGCCCCCGCGCTGGCGCAGGCGGACGTCGCGGTCGCCATGAACACGGGCACCCA GGCCGCGAAGGAGGCCGGGAACATGGTCGACCTCGACTCGAACCCGACCAAGCTCATCGAGATCGTCGAGATCGGAAAGC AGCTCCTGATGACGCGGGGCGCGCTCACGACCTTCAGCCTGGCGAACGACGTCGCCAAGTACTTCGCCATCATCCCGGCG GCCTTCGTCTCGACGTACCCCGCGCTCGGGCGGCTCAACGTGATGGGGCTCGCCACGCCGCGGAGCGCGGTGCTCTCCGC GGTGATCTTCAACGCGCTCATCATCGTCGCGCTGATCCCGCTCGCGCTCCGGGGCATCCGCTACCGGTCCGTCGGCGCGG AGCGGATGCTCCGCAGGAACCTGCTCGTGTACGGCCTGGGCGGGCTCGTCGTGCCGTTCGTGGGCATCAAGCTCATCGAT CTCCTCCTCTCCGCCCTCGGCCTCGCCTGA Protein sequence : MTLNLHSTAEVIAERGAPAPPPHLELSPPPRSRHPSRDVEGKKTAARPLLDPTILKPAIAAALRKLDPRHQIRNPVMFVV LAGSALTTALFVHALLGEGEEPAGFILAISLWLWFTVLFANFAEAVAEGRGKAQADTLRKARRDVEAAKLSAPEREAART TVPASNLRKGDLVLVEAGAIIPGDGDIVVGVASVDESAVTGESAPVVRESGGDRSAVTGGTRVLSDWLIIRISANPGEAF LDRMISMVEGAKRKKTPNEIALDILLAALTIVFLLATVTLLPYSIYGVRAAGQGTPITITVLTALLVCLIPTTIGGLLSA IGIAGMDRMIQANVIAMSGRAVEAAGDVDVLLLDKTGTITLGNRQATELIPADGVAAQALADAAQLASLADETPEGRSVV VLAKEKHGLRERDLGALGARFVPFTAQTRMSGVDCGAREIRKGAVEAIEAHVKEKGGAVPAAVRAVTEAIARRGGTPLVV AEGGAVLGVIHLKDILKGGIRERFGDLRRMGIKTVMITGDNPLTAAAIAAEAGVDDFLAQATPEAKLALIRDYQAGGRLV AMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQLLMTRGALTTFSLANDVAKYFAIIPA AFVSTYPALGRLNVMGLATPRSAVLSAVIFNALIIVALIPLALRGIRYRSVGAERMLRRNLLVYGLGGLVVPFVGIKLID LLLSALGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-159 | 62 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-159 | 62 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-120 | 53 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-120 | 53 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-120 | 53 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-120 | 53 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-121 | 53 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-120 | 53 |
