|
Name : SCE1572_08390 (SCE1572_08390) Accession : YP_008148129.1 Strain : Sorangium cellulosum So0157-2 Genome accession: NC_021658 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : - COG ID : - EC number : 5.3.1.5 Position : 2336310 - 2337641 bp Length : 1332 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGACCGTTGTCATTGGAGATAAAGAGTACTTCCCCGGTGTCGGCAAGATCCCCTACGAGGGGCCCGAGTCCGACAACCC CCTCGCCTTCAAGTGGTACGACGAAAAGCGCGTCGTCGCCGGCAAGGCGATGAAGGATCACTTCAAGTTTGCGGTGTGTT ACTGGCACACGTTCTGTGGTCGTGGGCACGACCCGTTCGGCCCGGGGACGATCCACTTCCCCTGGGACGAGGGCAAGGAC GCGCTGGCCCGCGCGCGCATGAAGATGGACGCGAGCTTCGAGTTCATCACCAAGCTCGGCGCGACGCACTACTGCTTTCA TGACATCGACCTCGTGGAAGAGGGCGACAGCCGCGCCGAGACGTCGCGCCGCCTCCAGAGCATCGTCGAGTACGCCAAGC AGAAGCAGGCGCAGTCGGGGATCAAGCTCCTGTGGGGCACGGCGAACCTGTTCTCCAACCCGCGCTACATGAACGGCGCC TCCACGAACCCGGATTTCGCCGTGGTGGCCTACGCCGGCGCCCAGCTGAAGGACGCCCTCGACGCCACCATCGCGCTGAA CGGCGAGAACTACGTGTTCTGGGGCGGCCGCGAGGGCTACATGAGCCTGCTGAACACGGACATGAAGCGCGAGAAGGACC ACTTCGCTCGCTTCCTGACCCTGGCGCGCGACTACGCGCGATCGCGCGGCTTCAAGGGCACCTTCTTCATCGAGCCGAAG CCCATGGAGCCCTCCAAGCACCAGTACGACTTCGACGCCGAGACCGTGATCGGGTTTTTGCGTCAGCACGGCCTGGACAA GGACTTCAAGCTCAACCTGGAGACGAACCACGCGACGCTCGCCGGCCACACCATGGAGCACGAGATGCAGGTGGCCGCCG ACGCCGGCATGCTCGGCAGCATCGACGCGAACCGCGGCGACTACCAGAACGCGTGGGACACCGACCAGTTCCCCTACAAC ATCAACGAGACCGTGGAGATGATGCTCATCCTGCTCCGCAGCGGCGGGCTCCAGGGCGGCGGCGTGAACTTCGACGCCAA GCGCCGCCGCAACTCGACGGATCTGATCGACACCTTCCACGGCCACATCGGCGGCATGGACGTGTTCGCCCGCGCGCTCA TCATCGCCGACGACCTGATCCGCAAGTCGCCGCTCGAGGCGATGCGCAAGGCCCGCTACGCGTCGTTCGACGGCGGCAAG GGCGCGGAGTTCGAGCAGGGGAAGCTCACGCTGGAGCAGCTGGCCGAGATCGGCAACGCCGGCGGCGAGGTCAAGCTCAC GAGCGGTCAGCAAGAGCTGTACGAGAACATCGTCAATCGCTACATCCGCTGA Protein sequence : MTVVIGDKEYFPGVGKIPYEGPESDNPLAFKWYDEKRVVAGKAMKDHFKFAVCYWHTFCGRGHDPFGPGTIHFPWDEGKD ALARARMKMDASFEFITKLGATHYCFHDIDLVEEGDSRAETSRRLQSIVEYAKQKQAQSGIKLLWGTANLFSNPRYMNGA STNPDFAVVAYAGAQLKDALDATIALNGENYVFWGGREGYMSLLNTDMKREKDHFARFLTLARDYARSRGFKGTFFIEPK PMEPSKHQYDFDAETVIGFLRQHGLDKDFKLNLETNHATLAGHTMEHEMQVAADAGMLGSIDANRGDYQNAWDTDQFPYN INETVEMMLILLRSGGLQGGGVNFDAKRRRNSTDLIDTFHGHIGGMDVFARALIIADDLIRKSPLEAMRKARYASFDGGK GAEFEQGKLTLEQLAEIGNAGGEVKLTSGQQELYENIVNRYIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 2e-94 | 49 |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 3e-94 | 49 |
