Gene Information

Name : SCE1572_07200 (SCE1572_07200)
Accession : YP_008147895.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Resistance
Product : macrolide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2045203 - 2046072 bp
Length : 870 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGAAGCTCGAGGCGATCACCAAGGTCTACTGGATGGGCGAGGTGGAGGTGCAGGCGCTCCGCGGCGTCTCCCTGGAGCT
CTCCCGGGGCGAGATGGTCGCCATCATGGGCGCCTCGGGGTCGGGCAAATCGACGACGCTGAACGTCATCGGCACGCTCG
ACCGGCCGACCGCCGGGCGGTACCTCCTCGACGACGAGCCGGTCGAGGAGCTCGACGAGGTCGAGCTCGCGCGGCTCCGC
AACCGCAAGATCGGGTTCGTCTTCCAGTCGTTCAACCTCCTGCCGCGCGACAGCGCCCTCGCCAACGTCGAGCTGCCCAT
GGTCTACGCCGGCGTCCGCCCGGTCGAGCGGCGGGAGCGGGCCGCGCGCGCCCTCGCGCGCGTCGGGCTCGCGGACCGGT
CGCATCACCTGCCGAACCAGCTGTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCGCGCCATCGTCAACGAGCCGCCG
CTCCTCCTCGCGGACGAGCCGACCGGCGCGCTCGACTCCGCCACCACCCAGCAGGTCATGGAGCTCTTCTGCGCCCTGCA
CGGGCAGGGCATGACGGTCGTCGTCGTCACCCACGACCCCTCGATCGCCGCGTACGCCACCCGGGTCGTCACGTTCCGGG
ACGGCGCCATCGTCGAGGACACCGGCCCCCGCGGCCGGCGCGTGGACGTCCCGGCGTCGTCGGTTCCTGGACCGGGGTCG
TCGGTTCCTGGACCGGGGTCATCGGTTCCTGGACCGGCGTCATCGGTTCCTGGACCGGCGTCATCGGTTCCTGGACCGGC
GTCATCGGTTCCTGGACCGGCGTCGTCGCCTCCCGGACGTTCGTCGACGCCCCCCGGAGGCCTCTCGTGA

Protein sequence :
MKLEAITKVYWMGEVEVQALRGVSLELSRGEMVAIMGASGSGKSTTLNVIGTLDRPTAGRYLLDDEPVEELDEVELARLR
NRKIGFVFQSFNLLPRDSALANVELPMVYAGVRPVERRERAARALARVGLADRSHHLPNQLSGGQQQRVAIARAIVNEPP
LLLADEPTGALDSATTQQVMELFCALHGQGMTVVVVTHDPSIAAYATRVVTFRDGAIVEDTGPRGRRVDVPASSVPGPGS
SVPGPGSSVPGPASSVPGPASSVPGPASSVPGPASSPPGRSSTPPGGLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-23 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-23 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_07200 YP_008147895.1 macrolide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-48 54
SCE1572_07200 YP_008147895.1 macrolide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-37 52
SCE1572_07200 YP_008147895.1 macrolide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-30 42
SCE1572_07200 YP_008147895.1 macrolide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-26 41