Gene Information

Name : SCE1572_06805 (SCE1572_06805)
Accession : YP_008147816.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1943920 - 1944216 bp
Length : 297 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGGACGGAGAAAGAGGAGGGCGTTCACGCCCGAGTTCAAGGCGGAGGCGGTACGGCTGGCGAAGGCGAGCGACCGGAG
CATCGGCCAGGTGGCGAAGGACCTCGACCCGACCGAAACGGCGCTGCGCGACTGGATCAAGCGCGCGGACACCGACGCGG
GCCACGGCCCGCCGGGGGCGCTGACGACGCCGGAGCGTGAGGAACTGCAGCGGCTGCGCCGCGACGTGAAGCGGCTGGAG
ATGGAGCGCGAGATCCTGAAAAAAGCGGCAGCCGTCTTCGCGAAGGAAAGCGAGTGA

Protein sequence :
MGRRKRRAFTPEFKAEAVRLAKASDRSIGQVAKDLDPTETALRDWIKRADTDAGHGPPGALTTPEREELQRLRRDVKRLE
MEREILKKAAAVFAKESE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 42
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-09 41
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 2e-09 41
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 2e-09 41
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 2e-09 41
unnamed AAF09021.1 unknown Not tested SHI-O Protein 3e-09 41
unnamed AAF09029.1 unknown Not tested SHI-O Protein 3e-09 41
unnamed CAD42047.1 hypothetical protein Not tested PAI II 536 Protein 5e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_06805 YP_008147816.1 hypothetical protein VFG1553 Protein 9e-13 42
SCE1572_06805 YP_008147816.1 hypothetical protein VFG1707 Protein 8e-10 41
SCE1572_06805 YP_008147816.1 hypothetical protein VFG1566 Protein 2e-12 41