Gene Information

Name : SCE1572_52015 (SCE1572_52015)
Accession : YP_008156738.1
Strain : Sorangium cellulosum So0157-2
Genome accession: NC_021658
Putative virulence/resistance : Virulence
Product : acetoacetate metabolism regulatory protein AtoC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 14583667 - 14585079 bp
Length : 1413 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGCTGACGATCTGGCACAAATCGGAGCCCCCCCGAGCGCGCCGCCGCCCGCCGGCGCCGCGCCGCCGCCCGGCGCGCC
GACGGTCCTCGTGGTCGACGACGAGCCGTCGAACGTCGCCTCGATCGAGAAGATCTTCCAGCGCGACGGCATGCGCGTCA
TCACGGCGGACAGCGCGAAGGCGGCGCTCGAGATCGTGCGCAGCCGCCGCGTCGAGGTGGTGCTCACCGACCTCATGATG
CCGGGGGTCAGCGGGCTCGAGCTGCTCCGCGCGCTCAAGCAGCTCGCGCCCGACACCGAGGTCGTGATGATGACCGCGTA
CGGGACCGTCGAGACCGCGGTCCAGGCCATGCGCGAGGGCGCCTACGACTTCGTGGAGAAGCCGCTCAAGCGGATGACGA
TCATCAAGAGCGTCCGCAAGGCCGCCGAGCGCCAGTCGCTCGTCGCCGAGAACCGGTCGCTGCGGCAGGAGATCAAGCTG
CTCACGAAGCGCGAGATCGTCGGCTCGAGCCCGACGCTCCGCCGCGTGCTCGACATCGCGACCCAGGCGGCGCCCTCGAG
CGCCACGGTGCTCGTGCTCGGCGAGAGCGGCACCGGCAAGGAGCTGCTCGCGCGCTTCATCCACGAGCGCAGCGCGCGCT
CGCGCGGGCCGTTCGTCGCGGTCAACTGCGCGGCCATCCCGGAGACCATCCTCGAGGCCGAGCTCTTCGGCCACGAGCGC
GGGGCGTTCACCGGCGCCCTCGCGAAGCGCGACGGCCGCTTCGCCAAGGCGGCCGGCGGCACGCTGTTCCTCGACGAGAT
CGGCGAGCTCTCGCCGGCCGTGCAGGTGAAGCTCCTCCGCGTGCTGCAGGAGGGCGAGTACGAGCCCGTCGGCGGCGACA
CGGTCCGCGCCGACGTGCGCCTCGTCGCCGCCACCAACAAGGACCTCCGCGCCGAGGTCGCCGCGGGGCGCTTCCGCGAG
GACCTGTTCTACCGGCTCAACGTGATCGCGATCACCGCGCCCCCGCTCCGGACCCGGCGCGAGGACATCCCGCTCCTCGT
CGACCACTTCCTCGGCGTCTACTGCACGAAGAACAACCGCCCCCGCCTGGAGGCGCCGCGCGACGTGCTGGCGCGCCTGA
CCGATTACACCTGGCCGGGCAACGTCCGCGAGCTCGAGAACGTGATCGAGCGCGCCGTGGTGCTCTGCCGCGGCGACCAG
CTCTCGGTCGACGACCTGCCCGACTTCATCCGCGAGGCCGCCCCCGCCGAGCCGAGCTCGCTCACGTTCTCGGTCGGCAC
CCCCCTCGACGAGGTCGAGCGCAGGCTCATCCGCGAGACGCTCCGCCACGCGCGCGGGGACAAATCCGTGGCCGCGCAGC
TGCTCGGCATCTCGACCCGCACCATCTACCGAAAGCTCGGCGAGCTGGAGTGA

Protein sequence : 
MADDLAQIGAPPSAPPPAGAAPPPGAPTVLVVDDEPSNVASIEKIFQRDGMRVITADSAKAALEIVRSRRVEVVLTDLMM
PGVSGLELLRALKQLAPDTEVVMMTAYGTVETAVQAMREGAYDFVEKPLKRMTIIKSVRKAAERQSLVAENRSLRQEIKL
LTKREIVGSSPTLRRVLDIATQAAPSSATVLVLGESGTGKELLARFIHERSARSRGPFVAVNCAAIPETILEAELFGHER
GAFTGALAKRDGRFAKAAGGTLFLDEIGELSPAVQVKLLRVLQEGEYEPVGGDTVRADVRLVAATNKDLRAEVAAGRFRE
DLFYRLNVIAITAPPLRTRREDIPLLVDHFLGVYCTKNNRPRLEAPRDVLARLTDYTWPGNVRELENVIERAVVLCRGDQ
LSVDDLPDFIREAAPAEPSSLTFSVGTPLDEVERRLIRETLRHARGDKSVAAQLLGISTRTIYRKLGELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
norR ABD94719.1 putative nitric oxide reductase transcriptional regulator Not tested ExoU island B Protein 3e-54 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_52015 YP_008156738.1 acetoacetate metabolism regulatory protein AtoC BAC0467 Protein 1e-85 47
SCE1572_52015 YP_008156738.1 acetoacetate metabolism regulatory protein AtoC BAC0089 Protein 4e-81 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE1572_52015 YP_008156738.1 acetoacetate metabolism regulatory protein AtoC VFG1214 Protein 9e-75 42
SCE1572_52015 YP_008156738.1 acetoacetate metabolism regulatory protein AtoC VFG0116 Protein 2e-65 41