Gene Information

Name : samB (SOD_p00460)
Accession : YP_008144395.1
Strain :
Genome accession: NC_021594
Putative virulence/resistance : Unknown
Product : protein SamB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 60908 - 62170 bp
Length : 1263 bp
Strand : -
Note : -

DNA sequence :
ATGTTTCTTTTAGCTGACGTCAATTCGATGTACTGCGCCTGCGAGCAAGTTTTTCGGCCAGACCTAAAAGGTAAACCATT
GATTGTATTATCAAATAATGATGGTAATTTGGTCGCAATTAACAGAGAGGCGAAAAAACTGGGTCTGAAACGCGGTATGC
CATTTTTCCAGGCTAAGGACATCATCAGAAAACATCAGGTTACTGTATTCTCTAGCAATTATTCGTTATATGGCGACTTA
TCTGCGCGTTGCATGACTGTTTTGGAATCCCTGGCGCCCGCGATCACCATCTACAGTATCGATGAGGCATTTTTGCACGT
CACCGGCATCGATGCCGTTGAGTCATTCGAAGACTATGGTCGGCGCGTTCGTGACACCGTTCTGCAGCAAACAGGACTCA
CCTGCGGCATTGGCGTTGCACAAACGATGACTTTAGCCAAGCTGGCCAACCTAGCTGCAAAGACCTGGCCTGCCACCGGC
GGCGTTGTCGATCTGACGAACCGCGACCGACAACGGAAGTTGATGGCGCTGCTGCCAGTCAACGAAGTTTGGGGATGTGG
GCGCCAGTTGACGAAAAAACTGGCCACAATGGGGATCACGACAGCCCTGCAACTTGCGGATAGTAACCAGGCGCTGATAC
GCCGGACATTTGGCGTTGTGCTCGAGCGGACACAACGTGAACTGAACGGGGTACCCTGCATCTCGATCGAGGCGCTGCCG
GCGAAGCAGCAGATCATCGTCAGCCGGTCATTTGGCCAGCGCGTCACGCAGCTGCAGGACATGCACCAGGCCGTGTGCCA
ATACGCAGAACGCGCCGCCGAGAAACTCCGCCGAGAGAAGCAGTATTGCAGACACATTTCGGTGTTTGTGCGAACCAGCC
CGTTTGCCCCTCACGACCCCTATTACGCGAACAGCAACAGCGTGCAGCTCATGCTGGCCACACAGGATACACGTGATGTC
GTGGCAGCGGCCGTGAAAGCACTTGAAGCCATCTGGCGCGACGGGTATCGCTACCAGAAAGCTGGCATCATGTTGAACGA
TTTCTGTGACAAGCCTGGCCAGATCGATCTGTTTGACGAACATCCTCCGCGCGCCGGCAGCGAACAATTGATGAAAGCCG
TCGATGGCATAAACCACTCCGGGTTAGGCAAAATTTGGTTTGCCGGCCAGGGGATCAATAAATCCTGGGCAATGCGTCGC
GAACTGCTGTCCCCTTGCTACACGACACGACTCAGCGACATTCCCGTCGCCAGGTTAGCGTAA

Protein sequence :
MFLLADVNSMYCACEQVFRPDLKGKPLIVLSNNDGNLVAINREAKKLGLKRGMPFFQAKDIIRKHQVTVFSSNYSLYGDL
SARCMTVLESLAPAITIYSIDEAFLHVTGIDAVESFEDYGRRVRDTVLQQTGLTCGIGVAQTMTLAKLANLAAKTWPATG
GVVDLTNRDRQRKLMALLPVNEVWGCGRQLTKKLATMGITTALQLADSNQALIRRTFGVVLERTQRELNGVPCISIEALP
AKQQIIVSRSFGQRVTQLQDMHQAVCQYAERAAEKLRREKQYCRHISVFVRTSPFAPHDPYYANSNSVQLMLATQDTRDV
VAAAVKALEAIWRDGYRYQKAGIMLNDFCDKPGQIDLFDEHPPRAGSEQLMKAVDGINHSGLGKIWFAGQGINKSWAMRR
ELLSPCYTTRLSDIPVARLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
umuC NP_807889.1 DNA polymerase V subunit UmuC Not tested SPI-7 Protein 2e-116 60
samB NP_458681.1 UV protection protein Not tested SPI-7 Protein 2e-116 60
rulB CAI36137.1 nucleotidyltransferase/DNA polymerase Not tested PPHGI-1 Protein 7e-74 44
unnamed ABR13403.1 DNA-directed DNA polymerase Not tested PAGI-5 Protein 2e-57 43