Gene Information

Name : ribD (SOD_c09120)
Accession : YP_008137115.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 999491 - 1000600 bp
Length : 1110 bp
Strand : +
Note : -

DNA sequence :
ATGCATAACGACGAATTTTATATGGCACGTGCCTTTGAGTTGGCGCGGCTGGGGCGTTTCACTACCGCACCGAACCCGAA
CGTCGGCTGCGTTATCGTGCGTGACGGCGAAATCGTCGGCGAAGGTTATCACCTGCGCGCCGGCGAACCTCATGCGGAAG
TGCATGCGTTGCGCATGGCGGGGGCGCGCGCGCGCGGCGCCACCGCTTATGTCACGCTGGAGCCTTGCAGCCATCACGGG
CGCACGCCGCCTTGCGCTGATGCGCTGGTCGCCGCTGGTGTTGCCCGCGTGGTTGCGGCGATGCAGGATCCCAACCCGGA
GGTTGCCGGTCGTGGCCTGTACAAGCTGCAACAGGCGGGTATAGACGTGCGCCATGGCCTGATGCTGAGCGATGCGGAAG
CGGTGAATCCGGGTTTTCTCAAACGCATGCGCACCGGTTTTCCTTATGTGCAACTGAAGCTGGGGGCCTCGCTCGATGGC
CGCACGGCCATGGCTTCCGGCGAGAGCCAGTGGATCACCTCACCGCAGGCGCGGCAGGACGTGCAGCGTTTGAGAGCGCA
AAGCGCCGCCATCCTGAGCACCAGCGCCACCGTGTTGGCCGACGATCCGTCGCTGACGGTGCGTTGGGATGAGCTGGATA
CCGCCACTCAGAGCCTCTACCCGCGTGAAAATCTGCGCCAGCCGCTGCGCATTATCCTCGACAGCCAGAACCGCGTAACG
CCGCAGCATCGGGTAGTGCAGCAGCCGGGAACGACCTGGCTGGCGCGGTTGCAGCCGGACGATCAGAACTGGCCGCAGGA
GGTTGAACAACTGACATTTCCGGCGCACGGCGGCGGGGTGGATCTGGTTGTGATGATGATGCAACTGGCGAAACGCCAGG
TGAATTCCATCTGGGTAGAAGCCGGCGCTGCGCTTTCCGGCGCGTTGTTGCAGGCAGGGCTGGTTGATGAGCTCATTTTG
TACATCGCGCCAAAACTGATGGGCGATAATGGGCGCGGCCTGTGCCGGTTGCCGGGCCTTGAAAACCTGGCCGATGCGCC
GGAATTCGTCTTCAGCGAAGTACGGCAAATAGGCCCCGACCTGCGCTTGCGGCTGAAGCCGAAATACTGA

Protein sequence :
MHNDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGEPHAEVHALRMAGARARGATAYVTLEPCSHHG
RTPPCADALVAAGVARVVAAMQDPNPEVAGRGLYKLQQAGIDVRHGLMLSDAEAVNPGFLKRMRTGFPYVQLKLGASLDG
RTAMASGESQWITSPQARQDVQRLRAQSAAILSTSATVLADDPSLTVRWDELDTATQSLYPRENLRQPLRIILDSQNRVT
PQHRVVQQPGTTWLARLQPDDQNWPQEVEQLTFPAHGGGVDLVVMMMQLAKRQVNSIWVEAGAALSGALLQAGLVDELIL
YIAPKLMGDNGRGLCRLPGLENLADAPEFVFSEVRQIGPDLRLRLKPKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-51 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-51 48