Gene Information

Name : mdeA (SOD_c06720)
Accession : YP_008136885.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase MdeA
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.11
Position : 747604 - 748794 bp
Length : 1191 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGACACTATCCGACACGCCTTTGCCACACGTGCGATCCACCACGGCTACGATCCTCAGCAATATCTGGGGGCGCT
TTGCCCACCGGTCTTTATGAGCTCGACCTTTGCCTTTCCCACGGCAGAATACGGCGGCGCCTGCTTTGCCGGCAGTGAGC
CGGGTTATTTTTATTCCCGCATCGCCAACCCGACGCTAAATCTGCTGGAACAGCGGATAGCCAACCTGGAGGGCGGGGAG
GCGGCGGTGGCGTTTTCTTCCGGCATGGGGGCGATAACCGCTTGTTGCTGGACGCTGCTGGCGCCGGGAGATGAGCTGAT
CGTCGATGAAACCATTTATGGCTGCACTTTCAGCTATTTTCATCAGGGGCTGGCGCGGTTTGGCGTCAAGGTTACGCACG
TCGATCTGACGCAGCCGGAAAAACTGGCCGCAGCCATGGGGCCACGTACCCGCCTGGTGTACTGCGAAACGCCGGCCAAC
CCCAATATGCGGTTGATCGATATCGCCGCAGTGGCGGAGATTACCCACCGGCAGCAGGCGCTGCTGCTGGTGGATAACAC
GTATTGCACTCCTTATTTGCAACGGCCGCTGGCGCTTGGTGCGGACATCGTGGTGCATTCCGCCACCAAATATATCGGTG
GCCACGGGGATTTGCTGGCCGGGTTGGCGATCACCCGCGAGGCGCTGGCGCAAGATATTCGCCTGGTCGGTCTGAAGGAC
ATGAACGGGGCGGTGCTGTCGGCGCAGGATGCGGCGTTGCTGTTGCGCGGTTTGAAGACCTTGCCGTTGCGCATGGAGCG
CCACTGCGGTAACGCTCAACGGCTGGCGGAAATGCTGGCTCAGCATCCTGCGGTAGAGCAGGTGTATTATCCGGGGCTGG
AGACTTTCCCGCAGTACCCTTTGGCTCAGCGGCAGATGACGCGTCCTGGCGGCATGATCGCTTTTGAACTTAAGGGCGGT
ATGGCGGCGGGCATTCGTTTCCTCAATGCCTTGCAGTTAATCTTGCGTGCCGTCAGCCTGGGGGATTGCGAAACGCTGGC
GCAGCATCCGGCGAGCATGACCCACTCGGCCTACAGCGCGGAAGAGCGTCAGCGCCATCATATCAGCGATGGATTGATTC
GCTTGTCGGCGGGCCTGGAGGATATAGAGGATTTGCGTGGCGATATCGAACAGGCGCTGGCGCAGGTGTGA

Protein sequence : 
MSDTIRHAFATRAIHHGYDPQQYLGALCPPVFMSSTFAFPTAEYGGACFAGSEPGYFYSRIANPTLNLLEQRIANLEGGE
AAVAFSSGMGAITACCWTLLAPGDELIVDETIYGCTFSYFHQGLARFGVKVTHVDLTQPEKLAAAMGPRTRLVYCETPAN
PNMRLIDIAAVAEITHRQQALLLVDNTYCTPYLQRPLALGADIVVHSATKYIGGHGDLLAGLAITREALAQDIRLVGLKD
MNGAVLSAQDAALLLRGLKTLPLRMERHCGNAQRLAEMLAQHPAVEQVYYPGLETFPQYPLAQRQMTRPGGMIAFELKGG
MAAGIRFLNALQLILRAVSLGDCETLAQHPASMTHSAYSAEERQRHHISDGLIRLSAGLEDIEDLRGDIEQALAQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-53 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-54 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mdeA YP_008136885.1 methionine gamma-lyase MdeA BAC0207 Protein 2e-125 67