Gene Information

Name : hpcD (SOD_c04970)
Accession : YP_008136713.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase HpcD
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.3.10
Position : 543666 - 544052 bp
Length : 387 bp
Strand : +
Note : -

DNA sequence :
ATGCCGCATTTTTATGCTGAATGCACCAACAACATCCGCGAAGAGGCCGATCTTCCCGCCTTGTTCGCCAAGGTCAATCA
GGCGCTGGCGGACACCGGCATCTTCCCGCTGGCCGGGGTACGCAGCCGCGCCCTCTGGCTGGACACCTGGCAGATGGCCG
ACGGCAAGCAGGATTACGCCTTCGTGCATATGACGCTGAAGATCGGCCACGGCCGCAGTCTGGAAAGCCGCGAGCAGGTC
GGCGAGATGCTGTTTGCGCTGATCAAGGAACACTTTGCCGCGTTGATGGCCAGCCGTTATCTGGCGCTGTCCTTCACCCT
TGAAGAGCTGGATCCGGTGCTGAATTACAAGCAGAACAATGTCCATGCGCTATTTCGCAAAGAGTAA

Protein sequence :
MPHFYAECTNNIREEADLPALFAKVNQALADTGIFPLAGVRSRALWLDTWQMADGKQDYAFVHMTLKIGHGRSLESREQV
GEMLFALIKEHFAALMASRYLALSFTLEELDPVLNYKQNNVHALFRKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 1e-52 87