|
Name : hpcC (SOD_c04950) Accession : YP_008136711.1 Strain : Serratia odorifera 4Rx13 Genome accession: NC_021591 Putative virulence/resistance : Unknown Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase HpcC Function : - COG functional category : - COG ID : - EC number : 1.2.1.- Position : 541048 - 542502 bp Length : 1455 bp Strand : + Note : - DNA sequence : ATGAAAACCATCAACCATTGGATCAACGGCAAGAACGTCGCCAGCAAAGAGTATTTCACCACCTGCAACCCGGCCAACGG CGAGGTGCTGGCGGAGGTGGCGTCCGGCGGGCAACGGGAGATCGACCAGGCGGTGGCCGCCGCCAAGGCCGCGTTCCCGA AATGGGCCAATACGCCGATGAAAGAGCGTGCGCGTCTGATGCGCCGTCTGGGCGAGCTGATTGACGAGAACGTGCCGCAG ATCGCCGAGATGGAAACCGCCGATACCGGTCTGCCGATCCACCAGACCAAAAACGTGCTGATCCCGCGAGCCTCGCATAA CTTCGAGTTCTTCGCCGAAATCTGCCAGCAGATGAACGGCCGCACCTACCCGGTGGACGACAAAATGCTCAACTACACGC TGATCCAGCCGGTCGGGGTGTGTGCGCTGGTGTCGCCGTGGAACGTGCCCTTCATGACCGCCACCTGGAAAACCGCGCCC TGCCTGGCACTGGGCAATACTGCGGTGTTGAAAATGTCCGAGTTATCGCCGTTGACCGCCGATCGCCTGGGCGAACTGGC GCTGGAAGCCGGCATCCCGGCCGGGGTGCTCAACGTGGTGCAGGGCTACGGCGCTACCGCCGGCGACGCGCTGGTGCGCC ATAAAGACGTGCGGGCGGTGTCCTTCACCGGCGGCACCGCCACCGGCCGCCGCATCATCGAGAGCGCCGGGTTGAAGAAA TTTTCCATGGAGCTGGGCGGCAAATCGCCGGTGCTGATTTTTGAGGATGCGGACATCGAACGCGCGCTGGATGCCGCGCT GTTCACCATCTTCTCGATCAACGGCGAACGCTGCACTGCCGGTTCGCGCATTTTCATTCAGGAAAGCATTTACCCGGAAT TCGTCAAACGTTTCGCCGAACGCGCCAACCGCCTGCGCGTGGGCGATCCGCAGGATCCCAACACCCAGGTGGGGGCGCTG ATCAGCCCGCAGCACTGGGAAAAAGTCTCCGGCTATATCCGCCTGGGGGTGGAAGAAGGGGCGACCCTGTTGGCCGGCGG CCCGGAAAAACCGGCCGGGCTGAGCCACGGCAACTTCCTGCGCCCGACGGTGCTGGCGGATGTCGACAACCGGATGCGCG TCGCGCAGGAGGAGATCTTCGGGCCGGTTGCCTGTCTGCTGCCGTTCAAATCGGAAGAAGACGGCCTGCGCATGGCCAAC GACGTGGAGTACGGCCTGGCGTCCTACATCTGGACGCAGGATGTGAGCAAGGTTCTGCGTCTGGCCCGCAATATTGAAGC GGGCATGGTGTTCGTCAACACCCAAAACGTACGCGATCTGCGCCAGCCGTTCGGTGGCGTGAAATCCTCCGGCACCGGCC GCGAGGGCGGCGAATACAGCTTTGAGGTGTTCGCCGAGATGAAGAACGTGTGCATTTCCATGGGGGACCACCCAATCCCG AAATGGGGCGTCTAA Protein sequence : MKTINHWINGKNVASKEYFTTCNPANGEVLAEVASGGQREIDQAVAAAKAAFPKWANTPMKERARLMRRLGELIDENVPQ IAEMETADTGLPIHQTKNVLIPRASHNFEFFAEICQQMNGRTYPVDDKMLNYTLIQPVGVCALVSPWNVPFMTATWKTAP CLALGNTAVLKMSELSPLTADRLGELALEAGIPAGVLNVVQGYGATAGDALVRHKDVRAVSFTGGTATGRRIIESAGLKK FSMELGGKSPVLIFEDADIERALDAALFTIFSINGERCTAGSRIFIQESIYPEFVKRFAERANRLRVGDPQDPNTQVGAL ISPQHWEKVSGYIRLGVEEGATLLAGGPEKPAGLSHGNFLRPTVLADVDNRMRVAQEEIFGPVACLLPFKSEEDGLRMAN DVEYGLASYIWTQDVSKVLRLARNIEAGMVFVNTQNVRDLRQPFGGVKSSGTGREGGEYSFEVFAEMKNVCISMGDHPIP KWGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 0.0 | 89 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-74 | 42 |
