Gene Information

Name : glnA (SOD_c46800)
Accession : YP_008140822.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Virulence
Product : glutamine synthetase GlnA
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 5258035 - 5259444 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGCTGAACACGTTTTGACGATGCTGAATGAGCATGAAGTGAAATTCGTAGACCTGCGTTTCACTGACACCAAGGG
TAAAGAACAACACGTCACCATCCCTGCTCATCAGGTGAATGCCGACTTCTTCGAAGAAGGTAAGATGTTTGACGGCTCCT
CGATCGGCGGCTGGAAAGGCATCAACGAATCTGACATGGTGCTGATGCCTGACGCCAGCACTGCGGTGCTGGATCCGTTC
TTCGAAGAATCCACCCTGATTATTCGCTGCGACATTCTCGAGCCAGGCACCATGCAGGGCTACGACCGTGACCCGCGTTC
CATCTCCAAGCGTGCAGAAGACTTCCTGCGCTCTTCCGGCATCGCGGATACCGTGCTGTTCGGGCCAGAGCCTGAGTTCT
TCCTGTTCGACGATATTCGTTTCGGCAGCAGCATCCGTGGTTCCCACGTGGCTATCGACGATGTCGAAGGCGCATGGAAC
TCCGGCACCAAATACGATGGCGGCAACAAAGGCCACCGTCCGGCAGTAAAAGGCGGTTACTTCCCGGTTCCTCCGGTCGA
CTCTTCACAGGACATCCGTTCTACCATGTGTCTGACCATGGAAGAAATGGGTCTGGTGGTCGAAGCGCACCACCACGAAG
TGGCAACCGCGGGTCAGAACGAAGTGGCAACCCGCTTCAACACCATGACCAAGAAAGCCGACGAAATCCAAATCTACAAA
TACGTGGTTCACAACGTGGCTCACGCATTTGGCAAAACCGCGACCTTCATGCCGAAACCTATGTTCGGTGATAACGGCTC
AGGTATGCACTGCCACATGTCGCTGTCCAAGAACGGCACTAACCTGTTCGCTGGCGACAAATACGGCGGCCTGTCTGAAA
CTGCCCTGTTCTACATCGGCGGTATCATCAAGCACGCTAAAGCGATCAATGCCCTGGCCAACCCGACCACCAACTCTTAC
AAGCGTCTGGTCCCAGGCTACGAAGCGCCGGTCATGCTGGCTTACTCAGCCCGTAACCGCTCCGCTTCCATCCGTATCCC
AGTGGTTGCCAGCCCGAAAGCGCGCCGTATCGAAGCCCGTTTCCCGGATCCAGCGGCTAACCCGTACCTGTGCTTCGCGG
CTCTGCTGATGGCAGGCCTGGATGGCGTGATTAACAAAATCCACCCTGGCGATGCCATGGACAAAAACCTGTATGACCTG
CCGCCGGAAGAAGAAGCTGAAATTCCAAAAGTTGCAGGCTCTCTGGACGAAGCGCTGGCTGCACTGAGCGAAGACCGCGA
GTTCCTGACCCGTGGCGGCGTATTCACCGACGACGCAATCGACGCTTACATCGACCTGCGTAAAGAAGAAATGGACCGCG
TTCGCATGACGCCGCACCCGGTTGAGTTCGAACTGTACTACAGCGTTTAA

Protein sequence :
MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAVLDPF
FEESTLIIRCDILEPGTMQGYDRDPRSISKRAEDFLRSSGIADTVLFGPEPEFFLFDDIRFGSSIRGSHVAIDDVEGAWN
SGTKYDGGNKGHRPAVKGGYFPVPPVDSSQDIRSTMCLTMEEMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK
YVVHNVAHAFGKTATFMPKPMFGDNGSGMHCHMSLSKNGTNLFAGDKYGGLSETALFYIGGIIKHAKAINALANPTTNSY
KRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEARFPDPAANPYLCFAALLMAGLDGVINKIHPGDAMDKNLYDL
PPEEEAEIPKVAGSLDEALAALSEDREFLTRGGVFTDDAIDAYIDLRKEEMDRVRMTPHPVEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-98 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_008140822.1 glutamine synthetase GlnA VFG1399 Protein 1e-114 50