Gene Information

Name : SOD_c45170 (SOD_c45170)
Accession : YP_008140666.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5076415 - 5076999 bp
Length : 585 bp
Strand : +
Note : -

DNA sequence :
TTGTCGAACCCTGGCGGTGAGCCGCAACGGGTTTTATCGCTGGCTTCAGGCAAAGCATCGTCCTGCGACATCATCAAATG
CCGAGCGGAATGCCCATGCTTTAACCTCGGACGATATGCGACCCGTAGCCTGATGAAAAAGCGGGGGTTATCGGGACATC
AGCGCCGACGCAAGTATGTATATACTCGCAATATTAGTGCTGCAATGCCTAACCATCTCGGTCGGGAATTTAGCGTTGAG
GCACCGAATAAAAAATGGGTGACTGACATTACCTATATCCCGACACGTCAGGGCTGGTGCTATCTGGCAGCCGTTATCGA
TCTTTACTCGCGTCAAGTCGTGGGTTGGGATGTAGCGAAAACAATGACGGCTGAGTTAGCTCTGAGGGCATTACGCCTGG
CAAAGCTGTTGCGACAACCGAAAGACAGCGTGTTGGTTCACTCAGATCAGGGCAGCCAATATACCAGTGGTGAGTGGCGT
AATTATGCTGCAAGTAATGGCGTAGAACTCAGCCAAAGCCGGCGAGGAAATTGCTGGGATAATGCTGTTATGGAACGTTT
TTTTGGCAGTCTGAAATCAGAGTGA

Protein sequence :
MSNPGGEPQRVLSLASGKASSCDIIKCRAECPCFNLGRYATRSLMKKRGLSGHQRRRKYVYTRNISAAMPNHLGREFSVE
APNKKWVTDITYIPTRQGWCYLAAVIDLYSRQVVGWDVAKTMTAELALRALRLAKLLRQPKDSVLVHSDQGSQYTSGEWR
NYAASNGVELSQSRRGNCWDNAVMERFFGSLKSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-23 45
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-23 45
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-23 44
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 3e-23 44
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 2e-23 44
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-23 44
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 3e-23 43
unnamed CAI43898.1 putative transposase Not tested LEE Protein 3e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SOD_c45170 YP_008140666.1 hypothetical protein VFG1484 Protein 2e-23 45
SOD_c45170 YP_008140666.1 hypothetical protein VFG0785 Protein 7e-24 44