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Name : papD (SOD_c44720) Accession : YP_008140621.1 Strain : Serratia odorifera 4Rx13 Genome accession: NC_021591 Putative virulence/resistance : Virulence Product : chaperone protein PapD Function : - COG functional category : - COG ID : - EC number : - Position : 5030377 - 5031123 bp Length : 747 bp Strand : + Note : - DNA sequence : ATGAATATGAACAAAAATCTGACAGCAACCATCGGCCTGGCGCTGCTGACCGCCATTCCCGCCGCCCATGCGGCGATATC GCTGGATCGTACCCGCGCCATCTACGTCGGTGACGCGAAATCCATCAGCCTGAATATCGTTAACGAAAACAAGGAGCTGC CTTTCCTGGCGCAATCCTGGCTGGAAAACGAACAGCATCAGAAAATCACCTCGCCGCTGGTGGTGCTGCCGCCGTTGCAG CGGGTAGAAGCCGGCGAACGTAGCGTAGTGCGCATCACCAAGACCCCGGAGGCCGACCGCCTGCCACAGGATCGCGAATC GGTGTTCTATTTCAACTTGCGTGAAATCCCACCGAAAAGCAGCAAAACCAACGTGATGCAGCTGGCTTTGCAGACCCAGA TCAAGCTTTTTTACCGGCCGAAGGCCATCGTCGCGCCCAAAGGCGAAGTGTGGCAGGAGAAGCTGGTGTTCCGTAAAAGC GCCGGTGGGTTCACCATCGAAAACCCCACGCCGTTTTATATCACCCTGACCGGCATCACCCGCCAGCCGCAGAAACAGGG CGGCGGCGCGATAAACGACTTCGAACCCGTGATGCTGAAACCGAAATCCAGCGAAAGCGTGAAGCTGCGCGACAACGGCC TGAGCAGCTTTGTCGTCACCTACATCAATGACTACGGCGGCCACCCCGAGCTGCGGTTCCAGTGCAACGGCACCCTCTGC ACCGCCGCGCCGGACGCGAAAAAATAA Protein sequence : MNMNKNLTATIGLALLTAIPAAHAAISLDRTRAIYVGDAKSISLNIVNENKELPFLAQSWLENEQHQKITSPLVVLPPLQ RVEAGERSVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIVAPKGEVWQEKLVFRKS AGGFTIENPTPFYITLTGITRQPQKQGGGAINDFEPVMLKPKSSESVKLRDNGLSSFVVTYINDYGGHPELRFQCNGTLC TAAPDAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 8e-60 | 56 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 1e-58 | 54 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 2e-58 | 54 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-58 | 54 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 4e-58 | 53 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 4e-58 | 53 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 3e-58 | 53 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 6e-54 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| papD | YP_008140621.1 | chaperone protein PapD | VFG1547 | Protein | 7e-59 | 54 |
| papD | YP_008140621.1 | chaperone protein PapD | VFG0896 | Protein | 2e-58 | 53 |
| papD | YP_008140621.1 | chaperone protein PapD | VFG0885 | Protein | 3e-54 | 52 |
