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Name : dnaB (SOD_c42600) Accession : YP_008140415.1 Strain : Serratia odorifera 4Rx13 Genome accession: NC_021591 Putative virulence/resistance : Unknown Product : replicative DNA helicase DnaB Function : - COG functional category : - COG ID : - EC number : 3.6.4.12 Position : 4800047 - 4801471 bp Length : 1425 bp Strand : - Note : - DNA sequence : ATGGCAGGAAAAAAACCAACCAACAAAACTTACGCGGACGAAGCCAGAGATCGCCCTCGAGATCGCCAGATGGAAGGGCT GAAGATGCCGCCACATTCGCTGGAGGCGGAACAGTCCGTGTTGGGCGGTTTGATGCTGGATAACGAACGCTGGGATAACG TATCGGAACGCGTGGTCTCCAACGATTTCTTCAGCCGCCCGCACCGCCTGATCTTTACCGAGATGCAGCGGCTGTTGGAA ATGAGCCGGCCTATCGATCTGATCACCCTGTCCGAATCGCTCGAGCAGCGCGGCGAACTGGATTCGGTGGGCGGTTTCGC CTATCTGGCCGAGCTGTCGAAAAACACCCCAAGCGCCGCCAACATCGGCGCTTATGCCGACATCGTGCGTGAACGTGCGG TCGTACGCGAAATGATCTCGGTAGCCAATGAGATCGCCGACGCCGGTTACGATCCGCAGGGCCGCAGCAGCGAAGATCTG CTCGATCTGGCCGAGTCGCGGGTATTCCAGATCGCGGAAAATCGCGCCAGTAAAGATGAAGGCCCGAAAGGTATCGAGCG TATTCTGGAAGACACCGTTTCGCGTATCGAACAGCTGTATCAGCAGCCGCACGACGGCGTTACCGGGGTAGACACCGGCT ATCAGGATCTCAATAAGAAAACTGCCGGTTTGCAAAAATCGGACCTGATCATCGTCGCCGCCCGTCCTTCGATGGGTAAA ACCACTTTCGCCATGAACTTGTGCGAACACGCCGCCATGACGCAGGAAAAGCCGGTGCTGATCTTCAGCCTGGAGATGCC CGGCAACCAGATCATGATGCGTATGCTGGCGTCGCTGTCGCGCGTCGACCAGACGCGTATCCGTACCGGCCAGCTCGACG ACGAGGACTGGGCGCGCATTTCCAGCACCATGGGCATCCTGCTGGAGAAGCGCAATATGTACATTGACGACTCCTCCGGC CTGACGCCAACCGAAGTACGCTCCCGAGCGCGCCGTATTTTCCGCGAACATGACGGCCTCAGCCTGATCATGATCGACTA CCTGCAGCTGATGCGTGTGCCGGCCCTGTCCGACAACCGTACGCTGGAAATCGCCGAAATCTCCCGCTCGCTGAAGGCGT TGGCGAAAGAGCTGCAGGTGCCGGTGGTGGCGCTGTCGCAGCTGAACCGAAGCCTGGAGCAGCGCGCCGACAAACGCCCG GTCAACTCAGACCTGCGTGAGTCCGGTTCCATCGAGCAGGATGCCGACCTGATCATGTTCATCTACCGTGATGAGGTTTA TCACGAGAACAGCGACATGAAAGGGATTGCCGAAATTATTCTGGGTAAGCAGCGTAACGGCCCGATCGGTACCGTGCGCC TGACCTTTAACGGCCAGTGGTCGCGTTTCGATAACTACGCGGGGCCACAATATGATGATGAATAA Protein sequence : MAGKKPTNKTYADEARDRPRDRQMEGLKMPPHSLEAEQSVLGGLMLDNERWDNVSERVVSNDFFSRPHRLIFTEMQRLLE MSRPIDLITLSESLEQRGELDSVGGFAYLAELSKNTPSAANIGAYADIVRERAVVREMISVANEIADAGYDPQGRSSEDL LDLAESRVFQIAENRASKDEGPKGIERILEDTVSRIEQLYQQPHDGVTGVDTGYQDLNKKTAGLQKSDLIIVAARPSMGK TTFAMNLCEHAAMTQEKPVLIFSLEMPGNQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKRNMYIDDSSG LTPTEVRSRARRIFREHDGLSLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRP VNSDLRESGSIEQDADLIMFIYRDEVYHENSDMKGIAEIILGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-98 | 53 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-104 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-104 | 52 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-103 | 52 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-100 | 50 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-90 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 9e-90 | 49 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-85 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-79 | 46 |
