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Name : kdsD (SOD_c41700) Accession : YP_008140325.1 Strain : Serratia odorifera 4Rx13 Genome accession: NC_021591 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase KdsD Function : - COG functional category : - COG ID : - EC number : 5.3.1.13 Position : 4709923 - 4710909 bp Length : 987 bp Strand : + Note : - DNA sequence : ATGTCGAACATTCAGTTGCAACCGGGCTTTGATTTTCAACAGGCAGGCAAAGAAGTGCTGCAGATTGAGCGTGACGGGCT GGCCCAGCTCGATCGGTACATCAATGCAGACTTTACCCGCGCCTGCGAATTGATCGCCGGCTGCTGCGGTAAAGTGGTCG TGATGGGCATGGGCAAATCCGGGCATATTGGCTGCAAGATCGCCGCGACCTTCGCCAGCACCGGAACACCCTCATTCTTC GTTCATCCGGCGGAGGCCAGCCACGGCGACCTCGGCATGGTGACGGCACAAGATATCGTGCTCGCCATTTCCAACTCCGG CGAGTCCAACGAGATCCAGGCGCTCATCCCGGTCTTGAAGCGCCAGCAAATCCCGCTGATCTGCATGACCAACAATCCGG AAAGCTCGATGGGCAAAGCGGCGGATATTCACCTGTGCATCAAGGTGCCGCAGGAGGCCTGCCCGCTTGGCCTGGCGCCA ACCACCAGCACCACCGCGACCCTGGTGATGGGTGATGCGCTGGCGGTGGCATTGCTGAAAGCTCGCGGTTTCACGCCGGA AGATTTTGCGCTGTCGCACCCCGGTGGCGCCCTGGGCCGCAGGTTGCTGCTGCGCGTTTGCGACATCATGCACAGCGGCG ACGAAATCCCGCACGTCAGCGCCGATGCATCGCTGCGCGACGCGTTGCTGGAAATCACGCGCAAAAACCTGGGCATGACG GTCATCTGCGACGATCTGATGAAAATCGCCGGTATCTTTACCGATGGTGACCTGCGGCGGATATTTGATATGGGCATCAA CCTCAATGAAGCCCGGATCGTCGATGTCATGACGCTCGGCGGCGTACGGGTGCGCCCGAACCTGCTGGCGGTCGATGCGT TGAACCTGATGCAGCAGCGCCATATCACCGCGCTGCTGGTTGCCGATGGCGACCAATTGCTGGGTGTGGTACATATGCAT GACATGCTGCGCGCCGGCGTCGTTTAA Protein sequence : MSNIQLQPGFDFQQAGKEVLQIERDGLAQLDRYINADFTRACELIAGCCGKVVVMGMGKSGHIGCKIAATFASTGTPSFF VHPAEASHGDLGMVTAQDIVLAISNSGESNEIQALIPVLKRQQIPLICMTNNPESSMGKAADIHLCIKVPQEACPLGLAP TTSTTATLVMGDALAVALLKARGFTPEDFALSHPGGALGRRLLLRVCDIMHSGDEIPHVSADASLRDALLEITRKNLGMT VICDDLMKIAGIFTDGDLRRIFDMGINLNEARIVDVMTLGGVRVRPNLLAVDALNLMQQRHITALLVADGDQLLGVVHMH DMLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 6e-40 | 44 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-40 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-40 | 44 |
