Gene Information

Name : lcrS (SOD_c40100)
Accession : YP_008140166.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : Low calcium response locus protein S
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4526043 - 4526309 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGCGTAAAGCCCGATTCACCGAACACCAGATCATTACCGTTCTGAAGTCCGTCGAAACCGGACGTACCGTCAAGGATGT
TTGCCGTGAAGCCGGTATATCTGAAGCCTCGTACTACAACTGGAAAGCAGAGTATGGCGGTATGGAAGCCTCTGATATCA
AAAAGATGAAAGACCTGGAGGATGAAAACCGACGCCTCAAACAGATGTTTGCTGATCTCAGCCTTGAGTGCCGGGCACTT
AAAGACGTCATCGAAAAAAAGCTTTAA

Protein sequence :
MRKARFTEHQIITVLKSVETGRTVKDVCREAGISEASYYNWKAEYGGMEASDIKKMKDLEDENRRLKQMFADLSLECRAL
KDVIEKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-34 93
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-19 53
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 1e-19 53
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 8e-17 51
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 5e-17 51
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 5e-17 51
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 9e-17 50