Gene Information

Name : qseB (SOD_c39430)
Accession : YP_008140100.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4449165 - 4449827 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAATTCTGCTGATAGAAGATGACAAGTTAATCGGTGACGGCATCAAGGCCGGGTTGACCAAACTCGGTTTTAATCT
GGACTGGTTTACCGACGGGTTGGTCGGCAAAAGCGCGCTGGAAAGCGCACCTTACGATGCGGTGATCCTCGATCTCAGCT
TGCCGGGCCTGGATGGGCTGGATTTATTGCGCCAGTGGCGCCAGGCCGGCCATGATGTGCCGGTGCTGATCCTTACCGCG
CGCGATGCGCTGGAGCAGCGGGTCAGCGGCCTGCAGAGCGGTGCCGATGATTACCTGTGCAAACCTTTCGCCCTAACGGA
AGTCGCGGCGCGCCTGCAGGCGTTGATCCGCCGCCGTCATGGCCAACTGATGCCGCAACTGGTGCATGGCAATCTGGTGT
TTGACTCGGCCACTCGCAGCGTGAACTGTAACGGCGAGCCGGTAACCTTGACGCCGCGTGAGCTGGCGGTGCTGGAGCTG
TTCCTGCATAACAAGGGACGAGTGCTGGCGCGGTCGCTGATCCAGGAAAAACTGTACAACTGGGATGACGAGGTCAGCAG
TAATGCCGTGGAAGTGCACATTCATCACCTGCGGCGCAAGTTAGGTAACGCTTTTATCCGTACCATTCACGGCGTGGGCT
ACACGTTGGGGGAGGTAGAGTGA

Protein sequence : 
MRILLIEDDKLIGDGIKAGLTKLGFNLDWFTDGLVGKSALESAPYDAVILDLSLPGLDGLDLLRQWRQAGHDVPVLILTA
RDALEQRVSGLQSGADDYLCKPFALTEVAARLQALIRRRHGQLMPQLVHGNLVFDSATRSVNCNGEPVTLTPRELAVLEL
FLHNKGRVLARSLIQEKLYNWDDEVSSNAVEVHIHHLRRKLGNAFIRTIHGVGYTLGEVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-34 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_008140100.1 transcriptional regulatory protein QseB BAC0487 Protein 2e-32 46
qseB YP_008140100.1 transcriptional regulatory protein QseB BAC0638 Protein 7e-23 44
qseB YP_008140100.1 transcriptional regulatory protein QseB BAC0347 Protein 1e-28 42
qseB YP_008140100.1 transcriptional regulatory protein QseB BAC0111 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_008140100.1 transcriptional regulatory protein QseB VFG0473 Protein 2e-32 44
qseB YP_008140100.1 transcriptional regulatory protein QseB VFG1390 Protein 4e-28 41