Gene Information

Name : tktA (SOD_c39100)
Accession : YP_008140067.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : transketolase 1
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 4407559 - 4409553 bp
Length : 1995 bp
Strand : -
Note : -

DNA sequence :
ATGTCCTCTCGTAAAGAGCTTGCCAACGCCATCCGCGCACTCAGCATGGACGCCGTACAAAAAGCAAATTCCGGCCATCC
GGGCGCACCTATGGGCATGGCGGACATCGCCGAAGTCCTGTGGCGCGACTACATGAACCACAACCCGACCAACCCGCACT
GGGCTGACCGCGACCGCTTCGTGCTGTCCAATGGCCACGGCTCCATGTTGATTTACAGCCTGCTGCACCTCACCGGCTAC
GACCTGCCGATGAGCGAGCTGGAAAACTTCCGCCAGCTGCATTCCAAAACCCCGGGCCACCCGGAGTACGGCTACACCCC
GGGCGTCGAAACCACCACCGGCCCGCTGGGCCAGGGCATCGCCAACGCCGTCGGTTTCGCCATTGCCGAACGCACCCTGG
GCGCGCAGTTCAACCGCCCGGGCCATGACATCGTCGACCACCACACCTACGCCTTTATGGGCGACGGCTGCATGATGGAA
GGCATCTCCCACGAAGTCTGTTCCCTGGCCGGTACCCTCAAGCTCGGCAAACTGACCGCGTTCTACGATGACAACGGCAT
CTCCATCGACGGTCACGTGGAAGGCTGGTTCACCGACGACACCGCCGAGCGCTTCGAAGCCTACGGCTGGCACGTGGTGC
GCCACGTCGACGGCCACAACCCGGACGCCATCAAGGCGGCGATTGAAGAAGCCCGCAAGGTCACCGACAAGCCGTCCCTG
CTGATGTGCAAAACCGTGATTGGTTTCGGTTCCCCGAACAAGGCCGGTACCCACGACGTGCACGGCGCTGCGCTGGGCGC
CGCCGAAGTGGCCGCCACCCGCGAAGCCCTGGGCTGGAAATACGCCGCCTTTGAAATCCCGCAGGACATCTATGCCCAGT
GGGACGCCAGGGAAGCCGGCCAGGCCAAAGAGTCTGCCTGGAACGACAAGTTCGCCGCCTACGCCAAGGCCTTCCCGGAA
CTGGCTGCCGAATTCACCCGCCGCGTGAACGGCGAACTGCCGGCCAACTGGAAAGCCGACGCGCAGAAATTCGTCGAGCA
GCTGCAGGCCAACCCGGCCAACATCGCCAGCCGCAAGGCGTCGCAAAACGCGCTGGAAGCCTTCGGCAAGGTGCTGCCGG
AATTCCTCGGCGGCTCGGCCGACCTGGCGCCAAGCAACCTGACGATGTGGTCCGGCTCCAAACCGCTCAATGAAGACCTG
GCGGGCAACTACATCCACTACGGCGTGCGCGAGTTCGGCATGACCGCCATCACCAACGGCATCGCGCTGCACGGCGGTTT
CCTGCCGTACTCCGCGACCTTCCTGATGTTCGTGGAATACGCCCGTAACGCGGTGCGCATGGCGGCGCTGATGAAAATCC
GCAATGTGTTCGTTTACACCCACGACTCCATCGGTCTGGGCGAAGACGGCCCGACGCACCAGCCGGTCGAGCAAATCGCC
AGCCTGCGCGTGACCCCGAACATGAGCACCTGGCGCCCGTGTGACCAGGTGGAATCGGCGGTTGCCTGGCAGTACGGCAT
CGAACGCAACGACGGCCCGACCACGCTGATTTTCTCGCGCCAGAACCTGACGCAGCAGCCACGCACCGCCGAACAACTGG
CGAACGTGTACCGCGGCGGCTACGTGCTGAAAGACTGCGCGGGTACGCCGGAAGTGATTTTGATTGCGACCGGTTCGGAA
GTGGGCATCACGGTGGAAGCGGCAGACAAGCTGAGTGCCGCGGGCACCAAAGTGCGTGTGGTGTCGATGCCGTCGACCGA
CGCGTTCGACAAGCAGGATGCGGCCTACCGTGAATCGGTGCTGCCGTCTTCGGTTACGGCGCGCGTGGCGGTGGAAGCGG
GTATCGCGGATTACTGGTACAAGTATGTGGGCCTGAACGGCGCCATCGTGGGCATGACCACCTTTGGCGAGTCGGCTCCG
GCAGACCAGCTGTTCAAAGAGTTCGGTTTCACCGTGGACAACGTGGTGGCCAAGGCGCAGGCGCTGCTGAAGTAA

Protein sequence :
MSSRKELANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWRDYMNHNPTNPHWADRDRFVLSNGHGSMLIYSLLHLTGY
DLPMSELENFRQLHSKTPGHPEYGYTPGVETTTGPLGQGIANAVGFAIAERTLGAQFNRPGHDIVDHHTYAFMGDGCMME
GISHEVCSLAGTLKLGKLTAFYDDNGISIDGHVEGWFTDDTAERFEAYGWHVVRHVDGHNPDAIKAAIEEARKVTDKPSL
LMCKTVIGFGSPNKAGTHDVHGAALGAAEVAATREALGWKYAAFEIPQDIYAQWDAREAGQAKESAWNDKFAAYAKAFPE
LAAEFTRRVNGELPANWKADAQKFVEQLQANPANIASRKASQNALEAFGKVLPEFLGGSADLAPSNLTMWSGSKPLNEDL
AGNYIHYGVREFGMTAITNGIALHGGFLPYSATFLMFVEYARNAVRMAALMKIRNVFVYTHDSIGLGEDGPTHQPVEQIA
SLRVTPNMSTWRPCDQVESAVAWQYGIERNDGPTTLIFSRQNLTQQPRTAEQLANVYRGGYVLKDCAGTPEVILIATGSE
VGITVEAADKLSAAGTKVRVVSMPSTDAFDKQDAAYRESVLPSSVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAP
ADQLFKEFGFTVDNVVAKAQALLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 84
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 69