Gene Information

Name : xerD (SOD_c38480)
Accession : YP_008140005.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4339035 - 4339934 bp
Length : 900 bp
Strand : -
Note : -

DNA sequence :
GTGCAACAGCAAGAGAGTGCGCTGATTGAGCAATTCCTGGATGCGCTTTGGCTCGAACGCAATCTGGCAGAAAATACGCT
GGCCTCTTACCGGCTGGATCTGCAGGCGCTGAGCGCCTGGCTGAACCATCAAAATACCTCGTTGTTACAGGCGCAGGCGC
TGGATTTGCAGGCGTTTCTCGCCGAACGGGTGGCGGGGGGCTACAAGGCGACCAGCTCTGCGCGTTTGCTGAGCGCCATG
CGCCGCCTGTTCCAGTATCTGTACCGTGAAAAGCTGCGGGAAGACGATCCGACCGCGCTGCTCGCCTCGCCGAAGCTGCC
GCAGCGGCTGCCGAAAGATTTGAGCGAAGCGCAAGTCGATGCCTTGTTGCAGGCGCCATGCGTCGATCAGCCGCTGGAGC
TGCGAGACAAGGCGATGCTGGAAGTGCTGTACGCCACCGGTCTGCGAGTGTCCGAACTGGTCGGGCTGACCATCAGCGAC
GTCAGCCTGCGCCAGGGCGTGGTGCGGGTGATCGGTAAAGGCAACAAGGAACGGCTGGTGCCGCTGGGCGAGGAGGCGGT
GTACTGGATCGAAAATTATCTGGAGCACGGCCGCCCGTGGATGGTCAACGGCCAGGCGCTGGATGTGCTGTTCCCAAGCA
ACCGCTGCCAGCAAATGACCCGACAGACGTTCTGGCATCGCATCAAACACTATGCGATCCTAGCGGGTATTGATAGCGAG
AGGCTGTCACCGCACGTGTTGCGCCACGCATTTGCCACCCATTTGCTGAACCACGGGGCCGATCTCCGTGTCGTACAGAT
GTTATTGGGGCACAGCGACCTCTCGACCACGCAAATTTATACGCATGTAGCGACCGAACGACTTAAACAGCTACATCAAC
AGCATCACCCGCGTGCGTGA

Protein sequence :
MQQQESALIEQFLDALWLERNLAENTLASYRLDLQALSAWLNHQNTSLLQAQALDLQAFLAERVAGGYKATSSARLLSAM
RRLFQYLYREKLREDDPTALLASPKLPQRLPKDLSEAQVDALLQAPCVDQPLELRDKAMLEVLYATGLRVSELVGLTISD
VSLRQGVVRVIGKGNKERLVPLGEEAVYWIENYLEHGRPWMVNGQALDVLFPSNRCQQMTRQTFWHRIKHYAILAGIDSE
RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-59 60
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-59 60