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Name : lysS (SOD_c38440) Accession : YP_008140001.1 Strain : Serratia odorifera 4Rx13 Genome accession: NC_021591 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase LysS Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 4333759 - 4335276 bp Length : 1518 bp Strand : - Note : - DNA sequence : ATGTCTGAGCAACAACCACAGGGCGCCGATCAGGCGTTGGAACTCAATAACGAGTTGCAGTCACGCCGTGAGAAACTGGC CGGGCTGCGCGAGAACGGCATTGCGTTCCCGAATGATTTCCGTCGCGACACCACGTCCGACAAGCTGCACGCTGCATACG GCGATAAAGATAACGAAGAGCTGGAAGCGCTGGGCGTAGAAGTTACCGTTGCAGGCCGCATGATGACCCGTCGTATCATG GGTAAAGCGTCATTCGTGACGCTGCAGGACGTCGGTGGCCGTATTCAGCTTTACGTCGCGCGCGACGATCTGGCGGAAGG CGTTTATAACGAGCAGTTCAAGAAGTGGGATCTGGGCGATATCCTTGGCGCTCGCGGCAAGCTGTTCAAAACCAAGACCG GCGAGCTGTCTATTCACTGTACCGAACTGCGCCTGCTGACCAAGGCCCTGCGCCCGTTGCCGGACAAGTTCCACGGTCTG GCCGATCAGGAAACCCGTTATCGCCAGCGTTATCTGGATCTGATCGCCAACGATGAATCGCGCAACACCTTCAAGGTGCG TTCTCAGGTGATGGCGGGGATCCGCAACTTCATGGTGGAACGCGGCTTCATGGAAGTCGAAACCCCAATGATGCAGGTGA TCCCGGGCGGCGCTTCTGCGCGTCCATTCGTGACTCACCACAATGCGCTGGACATCGATATGTACCTGCGTATTGCCCCG GAGCTGTACCTGAAGCGTCTGGTGGTCGGGGGCTTCGAGCGGGTGTTCGAAATCAACCGTAACTTCCGTAACGAAGGCGT TTCTCCGCGCCATAACCCAGAGTTCACCATGATGGAACTCTATATGGCTTACGCGGATTACAAAGACCTCATCGAGCTGA CAGAGTCGCTGTTCCGCACCCTGACTCAGGACGTGCTGGGCAAAACTCAGGTACAGTACGGTGACGAAGTGTTCGATTTC GGCAAGCCGTTTGAAAAACTGACCATGACCGAGGCGATCAAAAAATACCGTCCGGAAACCGATTTGGCCGATCTGGCTGA CATGGGCAAGGCGGTGGCTATCGCTGAATCCATCGGCATCAAGATTGAGAAGAGCTGGGGTCTGGGCCGTGTAGTCACCG AGATCTTCGAAGAAGTGGCGGAAAGCCACCTGATTCAGCCGACCTTCATTACCGAATACCCGGCGGAAGTGTCCCCGCTG GCGCGCCGTAATGATGAGAACCCGGAAATCACCGACCGTTTCGAGTTCTTCATTGGCGGGCGTGAAATCGGTAACGGCTT CTCCGAGCTGAACGACGCGGAAGACCAGGCGCAGCGCTTTGCTGACCAGGTGAATGCGAAAGACGCAGGCGATGACGAAG CGATGTTCTATGACGAAGACTACGTCACTGCGCTCGAGCACGGCCTGCCGCCGACGGCAGGCTTGGGTATCGGTATCGAT CGCATGGTTATGTTGTTCACCAACAGCCACACCATTCGCGATGTGATTCTGTTCCCGGCGATGCGCCCGCAGAAATGA Protein sequence : MSEQQPQGADQALELNNELQSRREKLAGLRENGIAFPNDFRRDTTSDKLHAAYGDKDNEELEALGVEVTVAGRMMTRRIM GKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANDESRNTFKVRSQVMAGIRNFMVERGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLTQDVLGKTQVQYGDEVFDF GKPFEKLTMTEAIKKYRPETDLADLADMGKAVAIAESIGIKIEKSWGLGRVVTEIFEEVAESHLIQPTFITEYPAEVSPL ARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFADQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-170 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008140001.1 | lysine--tRNA ligase LysS | VFG1668 | Protein | 3e-170 | 69 |
